Detailed information NTG0438551

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: HC659_RS06045
• Genome accession: NZ_CP051465
• Coordinates: 1184455..1185408 (+)
• Length: 317 a.a.
• NCBI ID: WP_089172509.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain UCMB5121
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1179455..1190408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC659_RS06020 (HC659_11920)	argF	1181288..1182247 (+)	960	WP_032721338.1	ornithine carbamoyltransferase	-
HC659_RS06025 (HC659_11930)	yjzC	1182333..1182512 (+)	180	WP_003245356.1	YjzC family protein	-
HC659_RS06030 (HC659_11940)	yjzD	1182558..1182743 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
HC659_RS06035 (HC659_11950)	-	1182992..1183726 (+)	735	WP_032721340.1	hypothetical protein	-
HC659_RS06040 (HC659_11960)	-	1183808..1184365 (+)	558	WP_089172508.1	hypothetical protein	-
HC659_RS06045 (HC659_11970)	med	1184455..1185408 (+)	954	WP_089172509.1	transcriptional regulator Med	Regulator
HC659_RS06050 (HC659_11980)	comZ	1185423..1185614 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
HC659_RS06055 (HC659_11990)	yjzB	1185644..1185883 (-)	240	WP_003232972.1	spore coat protein YjzB	-
HC659_RS06060 (HC659_12000)	fabH	1186048..1186986 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
HC659_RS06065 (HC659_12010)	fabF	1187009..1188250 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
HC659_RS06070 (HC659_12020)	yjaZ	1188326..1189111 (+)	786	WP_032721346.1	DUF2268 domain-containing protein	-
HC659_RS06075 (HC659_12030)	appD	1189303..1190289 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35322.85 Da
• Isoelectric Point: 4.6556

>NTDB_id=438551 HC659_RS06045 WP_089172509.1 1184455..1185408(+) (med) [Bacillus subtilis subsp. subtilis strain UCMB5121]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGNLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=438551 HC659_RS06045 WP_089172509.1 1184455..1185408(+) (med) [Bacillus subtilis subsp. subtilis strain UCMB5121]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGAATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CAACCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.054	100	0.991