Detailed information NTG0438288

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HGK50_RS01600
• Genome accession: NZ_CP051435
• Coordinates: 330134..330934 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-005
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325134..335934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGK50_RS01565 (HGK50_01570)	pseH	325636..326178 (+)	543	WP_202135742.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HGK50_RS01570 (HGK50_01575)	-	326111..327049 (-)	939	WP_202135743.1	tetraacyldisaccharide 4'-kinase	-
HGK50_RS01575 (HGK50_01580)	-	327046..327828 (-)	783	WP_202133077.1	NAD+ synthase	-
HGK50_RS01585 (HGK50_01590)	ilvC	328075..329067 (+)	993	WP_202133078.1	ketol-acid reductoisomerase	-
HGK50_RS01590 (HGK50_01595)	minD	329086..329892 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HGK50_RS01595 (HGK50_01600)	minE	329889..330122 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HGK50_RS01600 (HGK50_01605)	dprA	330134..330934 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HGK50_RS01605 (HGK50_01610)	dprB	330931..331335 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HGK50_RS01610 (HGK50_01615)	-	331463..332143 (+)	681	WP_202148237.1	tetratricopeptide repeat protein	-
HGK50_RS01615 (HGK50_01620)	-	332339..332677 (+)	339	WP_202135745.1	hypothetical protein	-
HGK50_RS01620 (HGK50_01625)	-	332661..333226 (+)	566	Protein_316	hypothetical protein	-
HGK50_RS07995 (HGK50_01630)	-	333238..333629 (+)	392	Protein_317	lysozyme	-
HGK50_RS07835	-	333650..333826 (+)	177	WP_014534379.1	hypothetical protein	-
HGK50_RS07840 (HGK50_01640)	-	333919..334104 (+)	186	WP_014534380.1	hypothetical protein	-
HGK50_RS01640 (HGK50_01645)	-	334258..334644 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HGK50_RS01645 (HGK50_01650)	-	334644..335429 (+)	786	WP_202135746.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=438288 HGK50_RS01600 WP_202133080.1 330134..330934(+) (dprA) [Helicobacter pylori strain ASHA-005]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=438288 HGK50_RS01600 WP_202133080.1 330134..330934(+) (dprA) [Helicobacter pylori strain ASHA-005]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41