Detailed information NTG0437509

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ID870_RS10435
• Genome accession: NZ_CP063198
• Coordinates: 2071035..2072144 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae CJB111
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2066035..2077144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID870_RS10410 (ID870_09840)	-	2066407..2067246 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
ID870_RS10415 (ID870_09835)	pgsA	2067246..2067788 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ID870_RS10420 (ID870_09830)	-	2067911..2069194 (-)	1284	WP_000217762.1	pitrilysin family protein	-
ID870_RS10425 (ID870_09825)	-	2069196..2070440 (-)	1245	WP_000706188.1	pitrilysin family protein	-
ID870_RS10430 (ID870_09820)	yaaA	2070679..2071032 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
ID870_RS10435 (ID870_09815)	recF	2071035..2072144 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
ID870_RS10440 (ID870_09810)	-	2072156..2073022 (-)	867	WP_000398683.1	GRP family sugar transporter	-
ID870_RS10445 (ID870_09805)	-	2073078..2073740 (-)	663	WP_001868421.1	helix-turn-helix transcriptional regulator	-
ID870_RS10450 (ID870_09800)	guaB	2073815..2075296 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
ID870_RS10455 (ID870_09795)	-	2075453..2075938 (-)	486	WP_001034427.1	arginine repressor	-
ID870_RS10460 (ID870_09790)	-	2075948..2076628 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=437509 ID870_RS10435 WP_000264870.1 2071035..2072144(+) (recF) [Streptococcus agalactiae CJB111]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=437509 ID870_RS10435 WP_000264870.1 2071035..2072144(+) (recF) [Streptococcus agalactiae CJB111]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447