Detailed information NTG0437128

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IMY14_RS13760
• Genome accession: NZ_CP063150
• Coordinates: 2637275..2638402 (+)
• Length: 375 a.a.
• NCBI ID: WP_174616726.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain s-16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2632275..2643402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMY14_RS13740	nucA/comI	2632661..2633071 (-)	411	WP_009967785.1	sporulation-specific Dnase NucB	Machinery gene
IMY14_RS13745	-	2633267..2633614 (+)	348	Protein_2691	sigma-70 family RNA polymerase sigma factor	-
IMY14_RS13750	spoIVCA	2633645..2635105 (-)	1461	WP_253206441.1	site-specific DNA recombinase SpoIVCA	-
IMY14_RS21995	-	2635063..2635241 (-)	179	Protein_2693	hypothetical protein	-
IMY14_RS13755	mauJ	2635543..2637069 (+)	1527	WP_174616725.1	methylamine utilization protein MauJ	-
IMY14_RS13760	rapC	2637275..2638402 (+)	1128	WP_174616726.1	response regulator aspartate phosphatase RapE	Regulator
IMY14_RS13765	phrE	2638392..2638526 (+)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
IMY14_RS13770	-	2638636..2638795 (+)	160	Protein_2697	hypothetical protein	-
IMY14_RS22215	-	2639164..2641089 (+)	1926	WP_174616727.1	T7SS effector LXG polymorphic toxin	-
IMY14_RS13780	-	2641103..2641390 (+)	288	WP_174616728.1	hypothetical protein	-
IMY14_RS13785	-	2641500..2642384 (-)	885	WP_172850651.1	EamA family transporter	-
IMY14_RS13790	-	2642459..2642632 (+)	174	WP_216119230.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44667.48 Da
• Isoelectric Point: 7.3392

>NTDB_id=437128 IMY14_RS13760 WP_174616726.1 2637275..2638402(+) (rapC) [Bacillus subtilis strain s-16]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDESRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNDEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAIDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=437128 IMY14_RS13760 WP_174616726.1 2637275..2638402(+) (rapC) [Bacillus subtilis strain s-16]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCACAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAGATCATGTTGGAATACACGCTGCCATCTGATGAAAGCCGAATGGAACTTTCAGAATATTTA
AAGAAAATTGAAGGTCATAAGAAAAAACTAGACAATATGCGGGCGTATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGATGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAAATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAAATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAATATCTATAAGAAACACGAGCTTTATTCTGTTCGGCGTATTCAATGTCATTTTGTGATTGCCGGCAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTTCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACTGCATTTTTCAATCTCGGCAATTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TATATCGAACAAGCCTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCGCAAGCTTATCATGACTTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGCGCCATAGACTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (184-246)

• Tetratricopeptide repeat (TPR_8) (259-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.897	100	0.413
rapF	Bacillus subtilis subsp. subtilis str. 168	38.196	100	0.384