Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HGB56_RS02445 Genome accession   NZ_CP051192
Coordinates   514708..515985 (-) Length   425 a.a.
NCBI ID   WP_033098964.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain LP-F1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 509708..520985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGB56_RS02440 (HGB56_02445) - 512959..514668 (-) 1710 WP_003640732.1 proline--tRNA ligase -
  HGB56_RS02445 (HGB56_02450) eeP 514708..515985 (-) 1278 WP_033098964.1 RIP metalloprotease RseP Regulator
  HGB56_RS02450 (HGB56_02455) - 516023..516808 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  HGB56_RS02455 (HGB56_02460) - 516824..517603 (-) 780 WP_003640735.1 isoprenyl transferase -
  HGB56_RS02460 (HGB56_02465) frr 517723..518286 (-) 564 WP_003640736.1 ribosome recycling factor -
  HGB56_RS02465 (HGB56_02470) pyrH 518288..519010 (-) 723 WP_003640737.1 UMP kinase -
  HGB56_RS02470 (HGB56_02475) tsf 519211..520089 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45853.39 Da        Isoelectric Point: 9.5616

>NTDB_id=436813 HGB56_RS02445 WP_033098964.1 514708..515985(-) (eeP) [Lactiplantibacillus plantarum strain LP-F1]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATIADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=436813 HGB56_RS02445 WP_033098964.1 514708..515985(-) (eeP) [Lactiplantibacillus plantarum strain LP-F1]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGGGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGTATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGATAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAAATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATATATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(208-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492
  eeP Streptococcus thermophilus LMG 18311

48.832

100

0.492