Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LP12_RS09195 | Genome accession | NC_016811 |
| Coordinates | 2054060..2054473 (-) | Length | 137 a.a. |
| NCBI ID | WP_015444381.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila ATCC 43290 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2049060..2059473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP12_RS09185 (lp12_1851) | letS | 2049990..2052722 (+) | 2733 | WP_010947629.1 | two-component system sensor histidine kinase LetS | Regulator |
| LP12_RS09190 (lp12_1852) | - | 2052819..2054063 (+) | 1245 | WP_010947630.1 | 6-phosphofructokinase | - |
| LP12_RS09195 (lp12_1853) | pilA2 | 2054060..2054473 (-) | 414 | WP_015444381.1 | pilin | Machinery gene |
| LP12_RS09200 (lp12_1854) | pilA2 | 2054670..2055080 (-) | 411 | WP_016356941.1 | pilin | Machinery gene |
| LP12_RS09205 (lp12_1855) | - | 2055383..2055700 (+) | 318 | WP_010947633.1 | BolA family protein | - |
| LP12_RS09210 (lp12_1856) | - | 2055775..2057196 (+) | 1422 | WP_010947634.1 | APC family permease | - |
| LP12_RS09215 (lp12_1857) | - | 2057327..2058757 (-) | 1431 | WP_010947635.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14505.91 Da Isoelectric Point: 6.2016
>NTDB_id=43672 LP12_RS09195 WP_015444381.1 2054060..2054473(-) (pilA2) [Legionella pneumophila subsp. pneumophila ATCC 43290]
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=43672 LP12_RS09195 WP_015444381.1 2054060..2054473(-) (pilA2) [Legionella pneumophila subsp. pneumophila ATCC 43290]
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.732 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
45.89 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.601 |
100 |
0.409 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.143 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |