Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | LP12_RS04680 | Genome accession | NC_016811 |
| Coordinates | 1022277..1022825 (+) | Length | 182 a.a. |
| NCBI ID | WP_010946663.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila ATCC 43290 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1017277..1027825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP12_RS04670 (lp12_0948) | ravI | 1019782..1020792 (-) | 1011 | WP_010946661.1 | Dot/Icm T4SS effector RavI | - |
| LP12_RS04675 (lp12_0949) | pilM | 1021209..1022273 (+) | 1065 | WP_010946662.1 | type IV pilus assembly protein PilM | Machinery gene |
| LP12_RS04680 (lp12_0950) | pilN | 1022277..1022825 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| LP12_RS04685 (lp12_0951) | pilO | 1022839..1023438 (+) | 600 | WP_014841277.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LP12_RS04690 (lp12_0952) | pilP | 1023435..1024022 (+) | 588 | WP_010946665.1 | pilus assembly protein PilP | Machinery gene |
| LP12_RS04695 (lp12_0953) | pilQ | 1024026..1026122 (+) | 2097 | WP_010946666.1 | type IV pilus secretin PilQ | Machinery gene |
| LP12_RS04700 (lp12_0954) | aroK | 1026568..1027095 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 21267.04 Da Isoelectric Point: 10.1404
>NTDB_id=43655 LP12_RS04680 WP_010946663.1 1022277..1022825(+) (pilN) [Legionella pneumophila subsp. pneumophila ATCC 43290]
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
Nucleotide
Download Length: 549 bp
>NTDB_id=43655 LP12_RS04680 WP_010946663.1 1022277..1022825(+) (pilN) [Legionella pneumophila subsp. pneumophila ATCC 43290]
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
99.451 |
100 |
0.995 |