Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | LPO_RS14280 | Genome accession | NC_018139 |
| Coordinates | 3164868..3165461 (+) | Length | 197 a.a. |
| NCBI ID | WP_011216607.1 | Uniprot ID | Q5WT52 |
| Organism | Legionella pneumophila subsp. pneumophila | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3159868..3170461
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPO_RS14250 | - | 3161338..3161627 (-) | 290 | Protein_2798 | GIY-YIG nuclease family protein | - |
| LPO_RS14255 | - | 3161653..3162112 (-) | 460 | Protein_2799 | hypothetical protein | - |
| LPO_RS14265 (LPO_3044) | - | 3162147..3162365 (+) | 219 | WP_014842777.1 | hypothetical protein | - |
| LPO_RS14270 (LPO_3045) | dnaX | 3162817..3164487 (+) | 1671 | WP_014842778.1 | DNA polymerase III subunit gamma/tau | - |
| LPO_RS14275 (LPO_3046) | - | 3164521..3164859 (+) | 339 | WP_010948445.1 | YbaB/EbfC family nucleoid-associated protein | - |
| LPO_RS14280 (LPO_3047) | recR | 3164868..3165461 (+) | 594 | WP_011216607.1 | recombination mediator RecR | Machinery gene |
| LPO_RS14285 (LPO_3048) | - | 3165454..3166314 (+) | 861 | WP_014842779.1 | DUF547 domain-containing protein | - |
| LPO_RS14290 (LPO_3049) | - | 3166311..3168308 (+) | 1998 | WP_014842780.1 | sulfatase-like hydrolase/transferase | - |
| LPO_RS14295 (LPO_3050) | - | 3168532..3170010 (-) | 1479 | WP_014842781.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21705.01 Da Isoelectric Point: 6.6782
>NTDB_id=43656 LPO_RS14280 WP_011216607.1 3164868..3165461(+) (recR) [Legionella pneumophila subsp. pneumophila]
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
Nucleotide
Download Length: 594 bp
>NTDB_id=43656 LPO_RS14280 WP_011216607.1 3164868..3165461(+) (recR) [Legionella pneumophila subsp. pneumophila]
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGTTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAACACATTAGTCATT
GCCAGCAGTGTAATAATTACACTGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGAGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGGCCTGATGACATAGGTCTACCGAAACTTAAAGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGCCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTCTAA
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGTTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAACACATTAGTCATT
GCCAGCAGTGTAATAATTACACTGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGAGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGGCCTGATGACATAGGTCTACCGAAACTTAAAGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGCCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
40.513 |
98.985 |
0.401 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
39.267 |
96.954 |
0.381 |