Detailed information NTG0436280

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: IL983_RS25330
• Genome accession: NZ_CP063047
• Coordinates: 5514794..5515819 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain KC-Tt-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5509794..5520819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IL983_RS25305 (IL983_25305)	-	5509983..5510300 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
IL983_RS25310 (IL983_25310)	trkA	5510449..5511822 (-)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
IL983_RS25315 (IL983_25315)	rsmB	5511849..5513153 (-)	1305	WP_034035845.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
IL983_RS25320 (IL983_25320)	fmt	5513150..5514094 (-)	945	WP_009316076.1	methionyl-tRNA formyltransferase	-
IL983_RS25325 (IL983_25325)	def	5514149..5514655 (-)	507	WP_003097293.1	peptide deformylase	-
IL983_RS25330 (IL983_25330)	tsaP	5514794..5515819 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
IL983_RS25335 (IL983_25335)	dprA	5515954..5517042 (+)	1089	WP_034035846.1	DNA-processing protein DprA	Machinery gene
IL983_RS25340 (IL983_25340)	-	5517083..5517640 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
IL983_RS25345 (IL983_25345)	-	5517650..5518627 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
IL983_RS25350 (IL983_25350)	hemF	5518818..5519735 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
IL983_RS25355 (IL983_25355)	aroE	5519793..5520617 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=436280 IL983_RS25330 WP_003097294.1 5514794..5515819(+) (tsaP) [Pseudomonas aeruginosa strain KC-Tt-1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=436280 IL983_RS25330 WP_003097294.1 5514794..5515819(+) (tsaP) [Pseudomonas aeruginosa strain KC-Tt-1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393