Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   HCM98_RS06040 Genome accession   NZ_CP051013
Coordinates   1158880..1159563 (+) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus tropicus strain LM1212-DB     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1153880..1164563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCM98_RS06020 (HCM98_06025) - 1154961..1156608 (+) 1648 Protein_1113 peptide ABC transporter substrate-binding protein -
  HCM98_RS06025 (HCM98_06030) - 1156637..1156840 (-) 204 WP_000559980.1 hypothetical protein -
  HCM98_RS06030 (HCM98_06035) spx 1157433..1157828 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  HCM98_RS06035 (HCM98_06040) - 1157878..1158552 (-) 675 WP_029437842.1 TerC family protein -
  HCM98_RS06040 (HCM98_06045) mecA 1158880..1159563 (+) 684 WP_000350711.1 adaptor protein MecA Regulator
  HCM98_RS06045 (HCM98_06050) - 1159636..1161180 (+) 1545 WP_029437843.1 cardiolipin synthase -
  HCM98_RS06050 (HCM98_06055) - 1161261..1162505 (+) 1245 WP_029437844.1 competence protein CoiA family protein -
  HCM98_RS06055 (HCM98_06060) pepF 1162556..1164382 (+) 1827 WP_029437845.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=436059 HCM98_RS06040 WP_000350711.1 1158880..1159563(+) (mecA) [Bacillus tropicus strain LM1212-DB]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=436059 HCM98_RS06040 WP_000350711.1 1158880..1159563(+) (mecA) [Bacillus tropicus strain LM1212-DB]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGGGTAGATAAAATTATAGACATTCCTTTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCCTTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGACCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACCATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568