Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   IL989_RS08100 Genome accession   NZ_CP062984
Coordinates   1625645..1626913 (+) Length   422 a.a.
NCBI ID   WP_088612811.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1620645..1631913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS08075 (IL989_08075) pyrH 1621440..1622162 (+) 723 WP_013352282.1 UMP kinase -
  IL989_RS08080 (IL989_08080) frr 1622165..1622722 (+) 558 WP_013352283.1 ribosome recycling factor -
  IL989_RS08085 (IL989_08085) - 1622848..1623630 (+) 783 WP_013352284.1 isoprenyl transferase -
  IL989_RS08090 (IL989_08090) - 1623634..1624431 (+) 798 WP_014470393.1 phosphatidate cytidylyltransferase -
  IL989_RS08095 (IL989_08095) dxr 1624487..1625638 (+) 1152 WP_013352286.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  IL989_RS08100 (IL989_08100) eeP 1625645..1626913 (+) 1269 WP_088612811.1 RIP metalloprotease RseP Regulator
  IL989_RS08105 (IL989_08105) proS 1626946..1628640 (+) 1695 WP_065981464.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46562.35 Da        Isoelectric Point: 6.1728

>NTDB_id=435935 IL989_RS08100 WP_088612811.1 1625645..1626913(+) (eeP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIVEVETADLEHEMKITGYEQGKEDELSGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKDNPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGAFAAIAYGATSTVDVTKAILTNLSKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=435935 IL989_RS08100 WP_088612811.1 1625645..1626913(+) (eeP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTGGGGCATTTACTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGGCCCAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACAATCAGGCTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGACGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATACCC
CGACGCTTTAATTGTCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACAGGGTATGAGCAGGGGAAAGAAG
ATGAACTGTCGGGCTTTACTGTCAGTCAGACCTCTTTTTTCATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAC
CGCCAATTCGGGTCAAAACCTGTATGGCAGCGGATTAAGGCGATTGCTGCCGGTCCGATTATGAACTTCATCTTAGCATA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGAAAACTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAGATGCGGTCATGGACTGACATC
GTGACAGCGGTAAAAGACAATCCCGGGAAAAAAATCGATGTCGCCGTGAAACGTGACGGCAAATCGTTTCATATCTCGGT
TACCCCTGAAGCCGTAAAAGATGAAAACAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGT
TTGCTGCGATCGCTTACGGCGCGACATCTACGGTTGATGTCACAAAGGCGATCTTGACCAATCTGAGCAAAATCGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCAGGCCCTGTCGGAATTTATGATATGACGGATCAGGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTTGGAATCGTCAACCTGCTGCCGATCCCGGCGCTTGACGGCG
GAAGACTGCTGTTTTTATTTATTGAAGCAATCCGCGGCAAGCCGATTAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTCGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

38.673

100

0.4
  eeP Streptococcus thermophilus LMG 18311

38.799

100

0.398