Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   HEQ84_RS01140 Genome accession   NZ_CP050870
Coordinates   197617..198879 (+) Length   420 a.a.
NCBI ID   WP_024704166.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CS6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 192617..203879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEQ84_RS01115 (HEQ84_01105) - 193198..194547 (+) 1350 WP_011680683.1 glucose-6-phosphate isomerase -
  HEQ84_RS01120 (HEQ84_01110) - 194735..195451 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  HEQ84_RS01125 (HEQ84_01115) - 195577..195915 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  HEQ84_RS01130 (HEQ84_01120) - 196044..196793 (+) 750 WP_002949314.1 isoprenyl transferase -
  HEQ84_RS01135 (HEQ84_01125) - 196806..197600 (+) 795 WP_014607913.1 phosphatidate cytidylyltransferase -
  HEQ84_RS01140 (HEQ84_01130) eeP 197617..198879 (+) 1263 WP_024704166.1 RIP metalloprotease RseP Regulator
  HEQ84_RS01145 (HEQ84_01135) - 198950..200812 (+) 1863 WP_024704167.1 proline--tRNA ligase -
  HEQ84_RS01150 (HEQ84_01140) - 201429..203369 (+) 1941 WP_024704168.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45620.06 Da        Isoelectric Point: 6.8829

>NTDB_id=435346 HEQ84_RS01140 WP_024704166.1 197617..198879(+) (eeP) [Streptococcus thermophilus strain CS6]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKNGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=435346 HEQ84_RS01140 WP_024704166.1 197617..198879(+) (eeP) [Streptococcus thermophilus strain CS6]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACATACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAAATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.762

100

0.998

  eeP Streptococcus thermophilus LMG 18311

99.524

100

0.995