Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HCU65_RS02145 Genome accession   NZ_CP050705
Coordinates   435549..436499 (+) Length   316 a.a.
NCBI ID   WP_010789705.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430549..441499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS02115 (HCU65_02115) - 431438..431647 (+) 210 Protein_387 ATP-binding protein -
  HCU65_RS02120 (HCU65_02120) rapC 431841..432989 (+) 1149 WP_061669569.1 Rap family tetratricopeptide repeat protein Regulator
  HCU65_RS02125 (HCU65_02125) phrC 432973..433092 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  HCU65_RS02130 (HCU65_02130) - 433227..433334 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  HCU65_RS02135 (HCU65_02135) - 433538..433621 (-) 84 WP_371176570.1 YjcZ family sporulation protein -
  HCU65_RS02140 (HCU65_02140) - 433752..435116 (-) 1365 WP_219947055.1 aspartate kinase -
  HCU65_RS02145 (HCU65_02145) ceuB 435549..436499 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  HCU65_RS02150 (HCU65_02150) - 436492..437439 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -
  HCU65_RS02155 (HCU65_02155) yclP 437433..438191 (+) 759 WP_004430271.1 petrobactin ABC transporter ATP-binding protein YclP -
  HCU65_RS02160 (HCU65_02160) - 438213..439166 (+) 954 WP_219947056.1 siderophore ABC transporter substrate-binding protein -
  HCU65_RS02165 (HCU65_02165) - 439457..440875 (-) 1419 WP_106034420.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34967.50 Da        Isoelectric Point: 9.8731

>NTDB_id=434095 HCU65_RS02145 WP_010789705.1 435549..436499(+) (ceuB) [Bacillus atrophaeus strain PENSV20]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGIIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=434095 HCU65_RS02145 WP_010789705.1 435549..436499(+) (ceuB) [Bacillus atrophaeus strain PENSV20]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCGTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATCAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGCGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525