Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BACAU_RS00245 | Genome accession | NC_016784 |
| Coordinates | 45960..46250 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis CAU B946 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 40960..51250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BACAU_RS00205 (BACAU_0030) | darA | 40978..41307 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| BACAU_RS00210 (BACAU_0031) | - | 41320..41760 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| BACAU_RS00215 (BACAU_0032) | holB | 41772..42761 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| BACAU_RS00220 (BACAU_0033) | ricT | 42764..43591 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| BACAU_RS00225 (BACAU_0034) | yabA | 43606..43965 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| BACAU_RS00230 (BACAU_0035) | - | 44025..44768 (+) | 744 | WP_014304191.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BACAU_RS00235 (BACAU_0036) | - | 44755..45054 (+) | 300 | WP_004264714.1 | GIY-YIG nuclease family protein | - |
| BACAU_RS00240 (BACAU_0037) | rsmI | 45029..45910 (+) | 882 | WP_014304192.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BACAU_RS00245 (BACAU_0038) | abrB | 45960..46250 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BACAU_RS00250 (BACAU_0039) | metG | 46733..48724 (+) | 1992 | WP_014304193.1 | methionine--tRNA ligase | - |
| BACAU_RS00255 (BACAU_0040) | - | 48800..49567 (+) | 768 | WP_041481816.1 | TatD family hydrolase | - |
| BACAU_RS00260 (BACAU_0041) | - | 49702..51027 (+) | 1326 | WP_088005470.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=43375 BACAU_RS00245 WP_169510469.1 45960..46250(-) (abrB) [Bacillus velezensis CAU B946]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=43375 BACAU_RS00245 WP_169510469.1 45960..46250(-) (abrB) [Bacillus velezensis CAU B946]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |