Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   HCN55_RS06305 Genome accession   NZ_CP050532
Coordinates   1223198..1224319 (+) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis subsp. subtilis str. SMY     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1218198..1229319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCN55_RS06270 (HCN55_06275) yjbB 1218840..1220057 (+) 1218 WP_010886478.1 MFS transporter -
  HCN55_RS06275 (HCN55_06280) yjbC 1220221..1220799 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  HCN55_RS06280 (HCN55_06285) spx 1220980..1221375 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  HCN55_RS06285 (HCN55_06290) yjbE 1221418..1222074 (-) 657 WP_003232944.1 TerC family protein -
  HCN55_RS06290 (HCN55_06295) - 1222244..1222384 (+) 141 WP_119122854.1 hypothetical protein -
  HCN55_RS06295 (HCN55_06300) mecA 1222351..1223007 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  HCN55_RS06300 (HCN55_06305) - 1223002..1223124 (-) 123 WP_003245684.1 hypothetical protein -
  HCN55_RS06305 (HCN55_06310) coiA 1223198..1224319 (+) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  HCN55_RS06310 (HCN55_06315) pepF 1224549..1226378 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  HCN55_RS06315 (HCN55_06320) - 1226416..1226583 (-) 168 WP_003244944.1 hypothetical protein -
  HCN55_RS06320 (HCN55_06325) spxH 1226897..1227796 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  HCN55_RS06325 (HCN55_06330) bhbI 1227793..1228191 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  HCN55_RS06330 (HCN55_06335) cwlQ 1228446..1229180 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=433730 HCN55_RS06305 WP_010886479.1 1223198..1224319(+) (coiA) [Bacillus subtilis subsp. subtilis str. SMY]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=433730 HCN55_RS06305 WP_010886479.1 1223198..1224319(+) (coiA) [Bacillus subtilis subsp. subtilis str. SMY]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(12-363)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31604

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1