Detailed information NTG0043327

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: SCIM_RS06195
• Genome accession: NC_018073
• Coordinates: 1279482..1283162 (-)
• Length: 1226 a.a.
• NCBI ID: WP_003076813.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1274482..1288162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS06180 (SCIM_1115)	glgD	1274782..1275921 (-)	1140	WP_003076392.1	glucose-1-phosphate adenylyltransferase subunit GlgD	-
SCIM_RS06185 (SCIM_1116)	-	1275911..1277053 (-)	1143	WP_003072133.1	glucose-1-phosphate adenylyltransferase	-
SCIM_RS06190 (SCIM_1117)	glgB	1277057..1278967 (-)	1911	WP_003076251.1	1,4-alpha-glucan branching protein GlgB	-
SCIM_RS06195 (SCIM_1118)	rexA	1279482..1283162 (-)	3681	WP_003076813.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
SCIM_RS06200 (SCIM_1119)	rexB	1283159..1286431 (-)	3273	WP_003076275.1	ATP-dependent nuclease subunit B	Machinery gene
SCIM_RS06205 (SCIM_1120)	-	1286553..1287767 (-)	1215	WP_003076401.1	ABC transporter permease	-

Sequence

Protein

• Length: 1226 a.a.
• Molecular weight: 141593.53 Da
• Isoelectric Point: 6.2077

>NTDB_id=43327 SCIM_RS06195 WP_003076813.1 1279482..1283162(-) (rexA) [Streptococcus intermedius JTH08]
MKRLPFLNQAEICALQHQEAQSNKTQKRTAEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFVSTFT
VKAASELKERLEKELSKALKETTNEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQSASEQLLLQ
NEVFEQVFEDFYQSDQAALFKKMVKNFTGQRKDLYGFREQVYKIYSFLQSTSNPIEWLEKDFLKGYEFADFQEEKAQLLT
KTKEALFDLEDFFHYHLIHEAKEFPKAKYLENVQRVLDGLSSLQGHSSEKVYLTALNHIVEISRDSNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQMTYHEEAKEILLVLQQFMKSFVTSYLNRKKEENAFEFADISHFAIQILE
ECSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGDNRFMVGDIKQSIYRFRQADPQIFNEKFKTYKEDSRQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPLYQTEFLIYDGALEADKEENDKEVSSVSAG
EVELVIKEIIRLYNEENVQFEDITLLTASRTRNDVILAEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTETNYVVHQENLYEKLKNARNGYGQYPELITPPLLKKIQQFQGTLQAWREYVKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQNSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTRFV
TDNDLTSEKIGQLKLKDAVIEEDLIENRQSEDIRRALDILENVDRLNTQYRAAIHLPSVQTPSQIKKFYEPVIDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEASVKKKINLQKIASFFGT
ELGQLLLKYTDRVYREAPFAMLKQDPASGQDFVVRGILDGYLLLADRIILFDYKTDQYTHSSELVKRYRGQLALYAEALR
RSYGIEKIEKYLVLLGESQLQVVKVD

Nucleotide

• Length: 3681 bp

>NTDB_id=43327 SCIM_RS06195 WP_003076813.1 1279482..1283162(-) (rexA) [Streptococcus intermedius JTH08]
ATGAAGAGACTACCATTTTTGAATCAAGCAGAAATTTGTGCTTTGCAGCATCAAGAAGCACAGTCTAATAAAACTCAAAA
ACGTACAGCAGAGCAAATCGAAGCCATCTACTCCTCTGGTCAAAACATTCTCGTGTCTGCTTCTGCAGGATCAGGAAAAA
CCTTTGTAATGGTGCAGCGGATTATTGATCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCGTTTCAACTTTCACC
GTAAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGAAAGAGTTGTCCAAGGCCTTGAAAGAAACAACTAATGAGGAACT
TAAACAGCACTTGGCGCAGCAATTAGCTGATATTCCCAATGCAGATATTGGAACTATGGACTCTTTCACTCAAAAAGTCC
TGAATAAATATGGTTATCTGTTGGAGTTGGCACCAAATTTTCGCATTTTACAAAGTGCGAGTGAACAATTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCAGCTTTGTTTAAAAAAATGGTCAAAAACTT
TACAGGTCAGAGGAAAGATTTGTATGGTTTTCGAGAGCAAGTTTATAAGATTTATTCTTTTTTGCAGTCTACTAGTAATC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGTTATGAGTTTGCAGATTTCCAAGAAGAGAAAGCACAACTCTTAACG
AAGACTAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTCCATTATCATTTGATCCATGAAGCCAAGGAATTTCCCAAAGC
AAAATATCTTGAAAATGTGCAGCGTGTGCTTGATGGCCTTTCAAGTTTACAAGGGCATTCCTCTGAGAAAGTCTATCTCA
CAGCGCTCAATCATATTGTAGAAATATCGCGTGACAGCAATGGAAAAGCCTTGACGAACAGCGGTCGTAAAGAAGAATTA
AAAGAAATCATCAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTCTACGAGACTTGGCGGATCAATTTTATCG
TTTTGAATTTCAAATGACCTACCATGAGGAAGCAAAAGAAATTTTGCTTGTTTTGCAGCAATTTATGAAATCGTTTGTTA
CAAGCTATTTGAATCGCAAAAAAGAAGAAAATGCTTTTGAATTTGCGGACATTAGTCATTTTGCTATTCAGATTTTAGAA
GAATGTTCGGATGTGCGTCAGTTTTATAGGAACAAATACCATGAAGTTATGGTAGATGAATATCAAGATACTAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGATAATCGCTTTATGGTAGGGGATATTAAACAGTCTATTTACCGTT
TTCGTCAAGCGGATCCGCAGATTTTCAATGAGAAATTCAAAACCTATAAAGAAGATAGCAGACAAGGGAAATTGATTGTC
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTGTTTAAGCGCCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTCGCTGGAAATCCTGATAAAAAAGAACCAAATCCCTTGTATCAGA
CAGAATTTCTCATTTATGATGGAGCGCTTGAAGCGGATAAGGAAGAGAATGACAAGGAGGTTTCTTCTGTTTCTGCAGGA
GAAGTAGAACTGGTAATTAAAGAAATTATTCGCCTGTACAATGAAGAAAATGTCCAATTTGAGGATATTACTTTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTAGCTGAATTTGCTAAATATGGTATTCCTGTCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGACACCTTGCGTACAATTAACAACCCTCTCAATGATTATGCT
TTAGTGGCGCTTTTAAAATCGCCAATGTTTAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGACAAATTATGTTGTCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCGGAATGGGTACGGGCAATATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAATTTCAAGGAACACTACAGGCTTGGCGAGAGTATGTGAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGCCAGGCCAATCTTTATGCACTGACCTTACGAGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATTGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCCAGTGTAGTCAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTTAATATGGACAAAGTATTTAATCG
TAAAGATAGCAGTTCTGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGCTTGTCTATTGATACTCTGCCTTATGAGCAAAATGAACGTGAGATCCAT
TTAGCCAGCATTTCGGAACAAATGCGTCTACTCTATGTTGCCATGACACGGGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAACAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAATGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAAGATGCGGTTATTGAAGAGGATTTAATAGAGAA
TCGCCAATCTGAGGATATTCGCAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACTCAGTATCGAGCTGCCA
TTCATCTACCGAGTGTTCAAACACCAAGTCAAATCAAGAAATTTTATGAACCAGTTATAGATACAGATGGTGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATTGGTAGCGCCGTCCATGAACTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGCAAGTGTTAAAAAGAAAATTAATTTGCAAAAGATAGCTAGTTTCTTTGGGACT
GAACTTGGACAGCTCCTTTTGAAGTATACAGACAGAGTATATCGTGAAGCCCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAAGATTTTGTTGTTCGTGGGATATTAGATGGCTATCTTCTATTAGCTGACCGAATTATTCTCTTTGACTATA
AAACGGATCAATACACTCATTCAAGTGAATTAGTCAAACGATACCGAGGGCAATTAGCACTTTATGCCGAAGCTCTTAGG
CGTTCGTATGGTATTGAAAAAATTGAAAAATACCTAGTGCTACTAGGTGAATCTCAACTTCAAGTAGTCAAGGTGGATTA
G

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1068-1204)

• UvrD-like helicase C-terminal domain (UvrD_C) (479-904)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	60.408	99.918	0.604