Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BCF_RS06370 | Genome accession | NC_016779 |
| Coordinates | 1225913..1226236 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus cereus F837/76 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1220913..1231236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCF_RS06345 (bcf_06470) | - | 1221184..1222470 (+) | 1287 | WP_000246000.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| BCF_RS06350 (bcf_06475) | sipW | 1222665..1223234 (+) | 570 | WP_000767810.1 | signal peptidase I SipW | - |
| BCF_RS06355 (bcf_06480) | - | 1223297..1223884 (+) | 588 | WP_000172840.1 | CalY family protein | - |
| BCF_RS06360 (bcf_06485) | - | 1224046..1224819 (+) | 774 | WP_000917478.1 | DUF4047 domain-containing protein | - |
| BCF_RS06365 (bcf_06490) | calY | 1225244..1225837 (+) | 594 | WP_000053734.1 | biofilm matrix protein CalY | - |
| BCF_RS06370 (bcf_06495) | sinR | 1225913..1226236 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| BCF_RS06375 (bcf_06500) | - | 1226316..1226450 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| BCF_RS06380 (bcf_06505) | inhA1 | 1226794..1229181 (+) | 2388 | WP_001035923.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| BCF_RS06385 (bcf_06510) | - | 1229353..1230720 (+) | 1368 | WP_000116802.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=43328 BCF_RS06370 WP_000578878.1 1225913..1226236(-) (sinR) [Bacillus cereus F837/76]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=43328 BCF_RS06370 WP_000578878.1 1225913..1226236(-) (sinR) [Bacillus cereus F837/76]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |