Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | G7A42_RS08900 | Genome accession | NZ_CP050459 |
| Coordinates | 1783109..1784011 (+) | Length | 300 a.a. |
| NCBI ID | WP_103323129.1 | Uniprot ID | - |
| Organism | Mammaliicoccus vitulinus strain Ani_LG-101 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1778109..1789011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G7A42_RS08860 (G7A42_08855) | - | 1778193..1778747 (+) | 555 | WP_103323127.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| G7A42_RS08865 (G7A42_08860) | - | 1778748..1780196 (+) | 1449 | WP_103323128.1 | rhomboid family intramembrane serine protease | - |
| G7A42_RS08870 (G7A42_08865) | - | 1780200..1780391 (+) | 192 | WP_016911882.1 | YqgQ family protein | - |
| G7A42_RS08875 (G7A42_08870) | - | 1780388..1781359 (+) | 972 | WP_016911883.1 | ROK family glucokinase | - |
| G7A42_RS08880 (G7A42_08875) | - | 1781359..1781673 (+) | 315 | WP_016911884.1 | MTH1187 family thiamine-binding protein | - |
| G7A42_RS08885 (G7A42_08880) | - | 1781703..1781978 (-) | 276 | WP_224658742.1 | DUF2759 domain-containing protein | - |
| G7A42_RS08890 (G7A42_08885) | - | 1782042..1782674 (+) | 633 | WP_016911886.1 | MBL fold metallo-hydrolase | - |
| G7A42_RS08895 (G7A42_08890) | - | 1782710..1782955 (-) | 246 | WP_016911887.1 | DUF2626 family protein | - |
| G7A42_RS08900 (G7A42_08895) | comGA | 1783109..1784011 (+) | 903 | WP_103323129.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| G7A42_RS08905 (G7A42_08900) | comGB | 1784004..1785041 (+) | 1038 | WP_209354560.1 | competence type IV pilus assembly protein ComGB | - |
| G7A42_RS08910 (G7A42_08905) | comGC | 1785055..1785372 (+) | 318 | WP_016911890.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| G7A42_RS08915 (G7A42_08910) | comGD | 1785372..1785800 (+) | 429 | WP_103323612.1 | competence type IV pilus minor pilin ComGD | - |
| G7A42_RS08920 (G7A42_08915) | comGE | 1785784..1786065 (+) | 282 | WP_016911892.1 | competence type IV pilus minor pilin ComGE | - |
| G7A42_RS08925 (G7A42_08920) | comGF | 1786040..1786474 (+) | 435 | WP_204107811.1 | competence type IV pilus minor pilin ComGF | - |
| G7A42_RS08930 (G7A42_08925) | - | 1786709..1787197 (+) | 489 | WP_103323613.1 | shikimate kinase | - |
| G7A42_RS08935 (G7A42_08930) | gcvT | 1787390..1788478 (+) | 1089 | WP_103323614.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34665.86 Da Isoelectric Point: 6.4127
>NTDB_id=432891 G7A42_RS08900 WP_103323129.1 1783109..1784011(+) (comGA) [Mammaliicoccus vitulinus strain Ani_LG-101]
MEKLFKSIIEDAIKSNVSDIHFIPVIDDKIVVQMRFNGDNKDYDLSLDAKLYNRLLIYMKFISHLDVSERNKAQSGQYIY
EHVMNYYLRISTIPISLGIESCAIRITPQYFIESDANRLNSDFIEIRNKMYQSEGLFLFTGPTGSGKTTLMYELMYDLKK
EKNKHIITIEDPVEQTLNGVVQVSVNERANISYQQSFKAILRCDPDVIMIGEIRDEETAKQVIQASLSGHLVLSTMHAKD
NIGAIHRLIELGITVEQIKQGISCIANQRLVKQDESSRCRKMSYMFSEHIIQYMVRDYHE
MEKLFKSIIEDAIKSNVSDIHFIPVIDDKIVVQMRFNGDNKDYDLSLDAKLYNRLLIYMKFISHLDVSERNKAQSGQYIY
EHVMNYYLRISTIPISLGIESCAIRITPQYFIESDANRLNSDFIEIRNKMYQSEGLFLFTGPTGSGKTTLMYELMYDLKK
EKNKHIITIEDPVEQTLNGVVQVSVNERANISYQQSFKAILRCDPDVIMIGEIRDEETAKQVIQASLSGHLVLSTMHAKD
NIGAIHRLIELGITVEQIKQGISCIANQRLVKQDESSRCRKMSYMFSEHIIQYMVRDYHE
Nucleotide
Download Length: 903 bp
>NTDB_id=432891 G7A42_RS08900 WP_103323129.1 1783109..1784011(+) (comGA) [Mammaliicoccus vitulinus strain Ani_LG-101]
ATGGAGAAATTATTTAAATCAATTATCGAAGACGCTATAAAATCAAATGTAAGCGATATTCATTTCATACCTGTAATAGA
CGATAAGATTGTTGTTCAGATGAGATTTAATGGTGACAACAAAGACTATGATTTATCGCTAGATGCTAAATTGTATAACA
GATTGCTAATCTATATGAAATTTATTTCTCACTTAGACGTAAGTGAGAGAAACAAAGCACAAAGTGGTCAGTATATTTAT
GAACATGTTATGAATTATTATTTAAGAATTTCGACGATACCAATTAGTTTAGGGATAGAATCATGTGCAATCAGGATAAC
ACCTCAATATTTTATTGAAAGTGATGCAAATAGGCTTAATTCAGATTTTATAGAAATTAGAAATAAGATGTATCAATCTG
AAGGTTTATTTCTATTTACTGGGCCTACAGGATCTGGTAAGACAACTTTAATGTATGAATTAATGTATGACTTAAAGAAA
GAAAAGAATAAACATATTATTACGATTGAGGATCCTGTGGAACAAACATTAAATGGCGTTGTACAAGTTTCTGTTAATGA
AAGAGCGAATATATCTTATCAACAGTCATTTAAAGCAATTTTAAGATGTGATCCTGATGTTATTATGATAGGTGAAATAA
GAGATGAAGAAACTGCTAAGCAAGTTATACAAGCAAGTTTAAGTGGGCATCTTGTGCTTTCAACTATGCATGCTAAAGAT
AATATCGGTGCAATACATAGATTAATTGAATTAGGCATAACTGTAGAACAAATTAAGCAAGGCATATCGTGTATTGCAAA
TCAGCGATTAGTTAAGCAAGATGAATCAAGTCGCTGTCGAAAAATGAGTTACATGTTTAGTGAACATATCATTCAATATA
TGGTGCGTGATTATCATGAATAA
ATGGAGAAATTATTTAAATCAATTATCGAAGACGCTATAAAATCAAATGTAAGCGATATTCATTTCATACCTGTAATAGA
CGATAAGATTGTTGTTCAGATGAGATTTAATGGTGACAACAAAGACTATGATTTATCGCTAGATGCTAAATTGTATAACA
GATTGCTAATCTATATGAAATTTATTTCTCACTTAGACGTAAGTGAGAGAAACAAAGCACAAAGTGGTCAGTATATTTAT
GAACATGTTATGAATTATTATTTAAGAATTTCGACGATACCAATTAGTTTAGGGATAGAATCATGTGCAATCAGGATAAC
ACCTCAATATTTTATTGAAAGTGATGCAAATAGGCTTAATTCAGATTTTATAGAAATTAGAAATAAGATGTATCAATCTG
AAGGTTTATTTCTATTTACTGGGCCTACAGGATCTGGTAAGACAACTTTAATGTATGAATTAATGTATGACTTAAAGAAA
GAAAAGAATAAACATATTATTACGATTGAGGATCCTGTGGAACAAACATTAAATGGCGTTGTACAAGTTTCTGTTAATGA
AAGAGCGAATATATCTTATCAACAGTCATTTAAAGCAATTTTAAGATGTGATCCTGATGTTATTATGATAGGTGAAATAA
GAGATGAAGAAACTGCTAAGCAAGTTATACAAGCAAGTTTAAGTGGGCATCTTGTGCTTTCAACTATGCATGCTAAAGAT
AATATCGGTGCAATACATAGATTAATTGAATTAGGCATAACTGTAGAACAAATTAAGCAAGGCATATCGTGTATTGCAAA
TCAGCGATTAGTTAAGCAAGATGAATCAAGTCGCTGTCGAAAAATGAGTTACATGTTTAGTGAACATATCATTCAATATA
TGGTGCGTGATTATCATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
49.832 |
99 |
0.493 |
| comGA | Staphylococcus aureus N315 |
49.832 |
99 |
0.493 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
42.238 |
92.333 |
0.39 |