Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G4G28_RS21345 Genome accession   NZ_CP050454
Coordinates   4649015..4649410 (-) Length   131 a.a.
NCBI ID   WP_182989832.1    Uniprot ID   A0A7G5ZI76
Organism   Massilia sp. Dwa41.01b     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4644015..4654410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G28_RS26995 - 4644734..4645666 (-) 933 WP_229507765.1 Hpt domain-containing protein -
  G4G28_RS21330 (G4G28_21330) - 4645693..4648047 (-) 2355 WP_183107806.1 methyl-accepting chemotaxis protein -
  G4G28_RS27665 - 4648084..4648212 (-) 129 WP_267875256.1 hypothetical protein -
  G4G28_RS27000 - 4648209..4648370 (-) 162 WP_229507767.1 hypothetical protein -
  G4G28_RS27005 - 4648346..4648486 (-) 141 WP_229507768.1 hypothetical protein -
  G4G28_RS21340 (G4G28_21340) - 4648624..4648992 (-) 369 WP_275944328.1 PleD family two-component system response regulator -
  G4G28_RS21345 (G4G28_21345) pilG 4649015..4649410 (-) 396 WP_182989832.1 PleD family two-component system response regulator Regulator
  G4G28_RS21350 (G4G28_21350) - 4649428..4649586 (+) 159 WP_182989833.1 hypothetical protein -
  G4G28_RS21355 (G4G28_21355) - 4649741..4649920 (-) 180 WP_182991627.1 rubredoxin -
  G4G28_RS21360 (G4G28_21360) - 4649989..4650828 (+) 840 WP_183107807.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  G4G28_RS21365 (G4G28_21365) hemL 4650825..4652123 (+) 1299 WP_183107808.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G4G28_RS21370 (G4G28_21370) - 4652297..4653007 (+) 711 WP_202033862.1 glycoside hydrolase family 19 protein -
  G4G28_RS21375 (G4G28_21375) - 4653027..4653470 (+) 444 WP_182989835.1 hypothetical protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14269.44 Da        Isoelectric Point: 7.9285

>NTDB_id=432865 G4G28_RS21345 WP_182989832.1 4649015..4649410(-) (pilG) [Massilia sp. Dwa41.01b]
MTTSQQATGLTVMVVDDSNTIRRSAEIFLTQAGYHVVLAEDGFDALAKINDHHPALVFCDILMPRLDGYQTCALIKKSAR
FHTTPVIMLSSKDGLFDRARGAMVGSSAYLTKPFSKDTLLAAVREHTAPKA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=432865 G4G28_RS21345 WP_182989832.1 4649015..4649410(-) (pilG) [Massilia sp. Dwa41.01b]
ATGACGACATCGCAGCAAGCAACCGGCCTGACCGTCATGGTGGTCGATGACAGCAACACGATCCGCCGCTCGGCCGAAAT
CTTCCTCACCCAGGCCGGTTACCACGTGGTACTGGCCGAGGATGGTTTCGACGCGCTGGCCAAGATCAACGACCATCATC
CGGCATTGGTGTTTTGCGACATCCTGATGCCGCGACTCGATGGTTACCAGACCTGCGCCCTGATCAAGAAGAGCGCACGG
TTCCATACCACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACCGCGCACGCGGTGCCATGGTCGGGTCGAG
CGCGTACCTGACCAAGCCATTTTCCAAAGACACCCTGCTCGCGGCCGTCCGCGAGCATACGGCCCCCAAAGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G5ZI76

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.333

91.603

0.58
  chiS Vibrio cholerae strain A1552

38.71

94.656

0.366