Detailed information NTG0432591

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BVELS4_RS17350
• Genome accession: NZ_CP050424
• Coordinates: 3509079..3510242 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain S4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3504079..3515242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVELS4_RS17320 (BVELS4_03470)	-	3504343..3504762 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
BVELS4_RS17325	comFC	3504836..3505525 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
BVELS4_RS17330 (BVELS4_03472)	-	3505531..3505815 (-)	285	WP_007407481.1	competence protein ComFB	-
BVELS4_RS17335 (BVELS4_03473)	comFA	3505873..3507258 (-)	1386	WP_167340893.1	DEAD/DEAH box helicase	Machinery gene
BVELS4_RS17340 (BVELS4_03474)	-	3507367..3508215 (-)	849	WP_044801920.1	DegV family protein	-
BVELS4_RS17345 (BVELS4_03475)	degU	3508313..3509002 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BVELS4_RS17350 (BVELS4_03476)	degS	3509079..3510242 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BVELS4_RS17355 (BVELS4_03477)	-	3510465..3511112 (+)	648	WP_007614107.1	YigZ family protein	-
BVELS4_RS17360 (BVELS4_03478)	-	3511117..3512337 (+)	1221	WP_105937243.1	LCP family protein	-
BVELS4_RS17365 (BVELS4_03479)	-	3512436..3513512 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BVELS4_RS17370 (BVELS4_03480)	-	3513645..3514841 (-)	1197	WP_167340894.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=432591 BVELS4_RS17350 WP_007407484.1 3509079..3510242(-) (degS) [Bacillus velezensis strain S4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=432591 BVELS4_RS17350 WP_007407484.1 3509079..3510242(-) (degS) [Bacillus velezensis strain S4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951