Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HPL003_RS24440 Genome accession   NC_016641
Coordinates   5500478..5502241 (+) Length   587 a.a.
NCBI ID   WP_014282474.1    Uniprot ID   G7VPZ8
Organism   Paenibacillus terrae HPL-003     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5495478..5507241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPL003_RS24425 (HPL003_25350) - 5496091..5497974 (+) 1884 WP_014282471.1 S8 family peptidase -
  HPL003_RS28005 - 5498040..5498282 (-) 243 WP_081473760.1 hypothetical protein -
  HPL003_RS24430 (HPL003_25355) - 5498370..5499845 (-) 1476 WP_014282472.1 PLP-dependent aminotransferase family protein -
  HPL003_RS24435 (HPL003_25360) - 5500024..5500431 (+) 408 WP_014282473.1 MarR family winged helix-turn-helix transcriptional regulator -
  HPL003_RS24440 (HPL003_25365) rcrP 5500478..5502241 (+) 1764 WP_014282474.1 ABC transporter ATP-binding protein Regulator
  HPL003_RS24445 (HPL003_25370) rcrQ 5502234..5504084 (+) 1851 WP_014282475.1 ABC transporter ATP-binding protein Regulator
  HPL003_RS24450 (HPL003_25375) - 5504343..5505563 (+) 1221 WP_014282476.1 PLP-dependent aminotransferase family protein -
  HPL003_RS24455 (HPL003_25380) - 5506316..5506882 (-) 567 WP_014282477.1 flavin reductase family protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64833.15 Da        Isoelectric Point: 7.0559

>NTDB_id=43257 HPL003_RS24440 WP_014282474.1 5500478..5502241(+) (rcrP) [Paenibacillus terrae HPL-003]
MLKIFKYLKKNEWMLVLYSLAFIVVQVWLDLKLPDYMAEITTKLQTEGTPISELLIPGSYMLLCAVGSMIASIIVGYFAA
KVAAGLAMRLRAMVFDKTLSFSMEEMNSFSTASLITRSTNDVTQIQTVVALGLQVIIKAPILAVWAIVKIADKNWQWTAS
TGGAVAVLILMLSVIIIFALPSFQKIQRLTDNLNRVTREHLTGLRVVRAYNADQYQEEKFGQANVELMNTNLFANRLMTM
VGPGMTFIMSGLSVSIYWIGAYLINGAAVPDRIALFSNMVVFSSYAMQVVMAFMMVSMIFFLMPRASISAKRIMEVLNTE
SRIVDGHETAGEEDVMGQVEFRNVSFKYPDAEEPVLSNISFTAKQGETIAFIGATGSGKTSVINLISRFYDVTEGEVLVD
GVNVRSYKQQTLHNKIGYVPQRAVLFSGTVASNVSYGDNGRADASEKLVKAAVGIAQGTEFVEKMDGQYQGRISQGGANV
SGGQKQRLSIARAIYRRPEIYIFDDSFSALDYRTDRILRSALKKETDHATTLIVAQRIGTIKDADRIIVLDQGEIVGNGT
HEELMASCGTYQEIAYSQLSKEELVHG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=43257 HPL003_RS24440 WP_014282474.1 5500478..5502241(+) (rcrP) [Paenibacillus terrae HPL-003]
ATGCTGAAGATATTCAAATATCTCAAGAAAAATGAATGGATGCTCGTGCTTTACAGCCTGGCTTTCATCGTTGTGCAGGT
ATGGCTTGATCTGAAGCTGCCTGATTATATGGCGGAAATTACGACCAAGCTGCAAACGGAAGGAACACCTATATCGGAAC
TGCTGATTCCCGGCAGTTATATGCTGTTGTGTGCCGTCGGCAGTATGATTGCATCTATTATTGTCGGCTATTTCGCGGCG
AAGGTGGCGGCAGGGCTGGCCATGCGTCTGCGTGCGATGGTCTTTGATAAGACCTTATCCTTTTCGATGGAAGAGATGAA
CAGCTTTTCGACGGCAAGCCTCATCACCCGCTCCACGAACGATGTTACCCAGATTCAAACGGTGGTTGCGCTGGGGCTAC
AGGTGATCATCAAGGCACCGATTCTGGCCGTGTGGGCCATTGTGAAGATTGCGGATAAAAACTGGCAGTGGACCGCCTCT
ACAGGAGGGGCCGTGGCTGTCCTGATCCTGATGCTGAGTGTCATTATTATTTTCGCTCTCCCCAGTTTCCAAAAAATCCA
GCGTCTCACCGATAATCTGAACAGGGTAACACGTGAGCATCTGACCGGGCTTCGGGTGGTGCGCGCTTATAATGCAGATC
AGTATCAGGAGGAGAAGTTCGGGCAGGCCAATGTCGAATTGATGAATACAAACCTGTTTGCGAACCGGTTAATGACAATG
GTTGGCCCGGGTATGACCTTTATTATGTCGGGTCTGAGTGTCTCTATCTATTGGATTGGCGCTTATCTGATTAACGGAGC
GGCCGTGCCGGACCGCATTGCGTTGTTCTCTAATATGGTCGTATTTTCCTCTTATGCGATGCAGGTGGTCATGGCCTTTA
TGATGGTAAGTATGATCTTCTTCCTGATGCCTCGAGCTTCGATTTCTGCGAAACGGATCATGGAGGTATTGAATACCGAA
TCCCGCATCGTTGATGGGCATGAGACGGCTGGAGAAGAGGACGTTATGGGTCAGGTGGAATTCCGTAATGTCAGCTTCAA
ATATCCGGATGCGGAGGAGCCCGTGCTTAGCAACATTAGCTTTACGGCAAAACAGGGCGAGACGATTGCCTTTATTGGCG
CAACAGGTAGCGGCAAAACCAGCGTAATCAATCTGATTTCCCGTTTTTACGATGTGACCGAGGGAGAGGTGCTCGTAGAT
GGGGTGAATGTCAGAAGCTATAAGCAGCAGACACTCCATAACAAAATCGGGTATGTCCCTCAGAGAGCCGTGCTTTTCAG
CGGTACAGTGGCATCCAACGTTTCGTATGGTGATAACGGAAGAGCAGACGCTTCGGAGAAACTCGTCAAAGCAGCCGTAG
GGATTGCCCAAGGCACAGAGTTTGTTGAAAAAATGGATGGTCAGTATCAGGGACGGATTTCACAAGGTGGAGCGAACGTG
TCCGGTGGTCAAAAGCAGCGTCTGTCCATTGCGCGTGCCATCTACCGTCGGCCGGAGATTTATATTTTCGATGATTCCTT
CTCGGCACTGGACTACAGAACAGACCGGATTCTGCGCTCTGCGCTTAAAAAAGAAACCGACCATGCTACGACACTCATTG
TCGCTCAGCGCATAGGCACCATTAAGGACGCTGATCGGATTATCGTATTGGACCAGGGCGAGATTGTAGGGAACGGCACG
CATGAAGAGCTGATGGCGAGCTGCGGGACCTATCAGGAGATTGCTTATTCGCAGCTTTCGAAGGAGGAACTCGTACATGG
ATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-292)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7VPZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.92

100

0.53

Multiple sequence alignment