Detailed information NTG0432533

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BVELS4_RS01965
• Genome accession: NZ_CP050424
• Coordinates: 391133..392281 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain S4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 386133..397281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVELS4_RS01945 (BVELS4_00387)	-	386554..387237 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
BVELS4_RS01950 (BVELS4_00388)	-	387252..388664 (-)	1413	WP_167340478.1	ABC transporter permease	-
BVELS4_RS01955 (BVELS4_00389)	-	388877..389560 (+)	684	WP_007410267.1	response regulator transcription factor	-
BVELS4_RS01960 (BVELS4_00390)	-	389547..390980 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
BVELS4_RS01965 (BVELS4_00391)	rapC	391133..392281 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BVELS4_RS01970 (BVELS4_00392)	phrC	392265..392384 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BVELS4_RS01975	-	392532..392627 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
BVELS4_RS01980 (BVELS4_00393)	-	392722..394086 (-)	1365	WP_020955323.1	aspartate kinase	-
BVELS4_RS01985 (BVELS4_00394)	ceuB	394500..395453 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
BVELS4_RS01990 (BVELS4_00395)	-	395443..396390 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BVELS4_RS01995 (BVELS4_00396)	-	396384..397142 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=432533 BVELS4_RS01965 WP_007410270.1 391133..392281(+) (rapC) [Bacillus velezensis strain S4]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=432533 BVELS4_RS01965 WP_007410270.1 391133..392281(+) (rapC) [Bacillus velezensis strain S4]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568