Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HB747_RS27280 Genome accession   NZ_CP050322
Coordinates   5873080..5873487 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain DVT729     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5868080..5878487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB747_RS27260 (HB747_27305) pilK 5869012..5869887 (-) 876 WP_174707623.1 type 4 fimbrial methyltransferase PilK -
  HB747_RS27265 (HB747_27310) pilJ 5869948..5871996 (-) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  HB747_RS27270 (HB747_27315) - 5872081..5872617 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  HB747_RS27275 (HB747_27320) pilH 5872668..5873033 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  HB747_RS27280 (HB747_27325) pilG 5873080..5873487 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HB747_RS27285 (HB747_27330) gshB 5873742..5874695 (+) 954 WP_003100943.1 glutathione synthase -
  HB747_RS27290 (HB747_27335) - 5874842..5875735 (+) 894 WP_003084580.1 TonB family protein -
  HB747_RS27295 (HB747_27340) - 5875784..5876353 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  HB747_RS27300 (HB747_27345) ruvX 5876353..5876787 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HB747_RS27305 (HB747_27350) pyrR 5876899..5877411 (+) 513 WP_174707624.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HB747_RS27310 (HB747_27355) - 5877435..5878439 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=431454 HB747_RS27280 WP_003084583.1 5873080..5873487(-) (pilG) [Pseudomonas aeruginosa strain DVT729]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=431454 HB747_RS27280 WP_003084583.1 5873080..5873487(-) (pilG) [Pseudomonas aeruginosa strain DVT729]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385