Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HB751_RS05985 Genome accession   NZ_CP050272
Coordinates   1227444..1228169 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain P6     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1222444..1233169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB751_RS05950 (HB751_05950) rnpM 1222615..1222911 (-) 297 WP_002263922.1 RNase P modulator RnpM -
  HB751_RS05955 (HB751_05955) nusA 1222929..1224122 (-) 1194 WP_002262603.1 transcription termination factor NusA -
  HB751_RS05960 (HB751_05960) rimP 1224158..1224649 (-) 492 WP_002262604.1 ribosome maturation factor RimP -
  HB751_RS05970 (HB751_05970) trmB 1224921..1225556 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HB751_RS05975 (HB751_05975) ccrZ 1225566..1226348 (-) 783 WP_002262606.1 cell cycle regulator CcrZ -
  HB751_RS05980 (HB751_05980) pptB 1226407..1227441 (-) 1035 WP_002286148.1 ABC transporter permease Regulator
  HB751_RS05985 (HB751_05985) pptA 1227444..1228169 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  HB751_RS05990 (HB751_05990) - 1228234..1228653 (+) 420 WP_002262609.1 HIT family protein -
  HB751_RS05995 (HB751_05995) - 1228650..1228943 (+) 294 WP_002265649.1 hypothetical protein -
  HB751_RS06000 (HB751_06000) brpA 1229113..1230333 (-) 1221 WP_002269512.1 biofilm formation/cell division transcriptional regulator BrpA -
  HB751_RS06005 (HB751_06005) tsaE 1230664..1231107 (-) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  HB751_RS06010 (HB751_06010) - 1231235..1232665 (-) 1431 WP_002310941.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=431186 HB751_RS05985 WP_002262608.1 1227444..1228169(-) (pptA) [Streptococcus mutans strain P6]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=431186 HB751_RS05985 WP_002262608.1 1227444..1228169(-) (pptA) [Streptococcus mutans strain P6]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759