Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   HB751_RS05980 Genome accession   NZ_CP050272
Coordinates   1226407..1227441 (-) Length   344 a.a.
NCBI ID   WP_002286148.1    Uniprot ID   -
Organism   Streptococcus mutans strain P6     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221407..1232441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB751_RS10520 - 1222204..1222299 (-) 96 Protein_1177 translation initiation factor IF-2 N-terminal domain-containing protein -
  HB751_RS05945 (HB751_05945) - 1222320..1222622 (-) 303 WP_002262601.1 YlxQ-related RNA-binding protein -
  HB751_RS05950 (HB751_05950) rnpM 1222615..1222911 (-) 297 WP_002263922.1 RNase P modulator RnpM -
  HB751_RS05955 (HB751_05955) nusA 1222929..1224122 (-) 1194 WP_002262603.1 transcription termination factor NusA -
  HB751_RS05960 (HB751_05960) rimP 1224158..1224649 (-) 492 WP_002262604.1 ribosome maturation factor RimP -
  HB751_RS05970 (HB751_05970) trmB 1224921..1225556 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HB751_RS05975 (HB751_05975) ccrZ 1225566..1226348 (-) 783 WP_002262606.1 cell cycle regulator CcrZ -
  HB751_RS05980 (HB751_05980) pptB 1226407..1227441 (-) 1035 WP_002286148.1 ABC transporter permease Regulator
  HB751_RS05985 (HB751_05985) pptA 1227444..1228169 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  HB751_RS05990 (HB751_05990) - 1228234..1228653 (+) 420 WP_002262609.1 HIT family protein -
  HB751_RS05995 (HB751_05995) - 1228650..1228943 (+) 294 WP_002265649.1 hypothetical protein -
  HB751_RS06000 (HB751_06000) brpA 1229113..1230333 (-) 1221 WP_002269512.1 biofilm formation/cell division transcriptional regulator BrpA -
  HB751_RS06005 (HB751_06005) tsaE 1230664..1231107 (-) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40570.00 Da        Isoelectric Point: 10.6270

>NTDB_id=431185 HB751_RS05980 WP_002286148.1 1226407..1227441(-) (pptB) [Streptococcus mutans strain P6]
MKAIFTKRRFHFINQCSRYLRYVFNDHFVLVLIFLLGFLMVQYSQLLKHFPANHWPIMLVLALVVLTLLFWGNIATYLEP
ADQQFLLVREKDIVALIQKAKRRALFFWGTWQTLLLLILAPLFLRLGLALFSFLFLLLFLLFLKGLIIEKKSRAFLKQKG
LNWDHALNQEKKRQQAILKFFSLFTNVKGISNSVKRRAYLDFGTKLLPKETHKAWTNLYLRAFLRSGDYLGLTFRLGFLS
LLSLLFIDNPLMSAGLALLFNYLLLFQLLALYKHYDYQYLTALFPISKAEKKANLKQLLRVILYFLTAVEFCFSFSWQKT
IILLLAMLCLNEVYLPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=431185 HB751_RS05980 WP_002286148.1 1226407..1227441(-) (pptB) [Streptococcus mutans strain P6]
ATGAAGGCAATTTTTACAAAAAGACGATTCCATTTTATCAATCAATGCAGTCGATACCTTCGCTATGTTTTTAATGATCA
TTTTGTTTTAGTATTGATTTTTTTACTAGGTTTTCTTATGGTACAGTATAGTCAACTGTTAAAACATTTTCCGGCTAATC
ATTGGCCTATCATGCTTGTTTTAGCGTTAGTTGTCTTGACCTTACTATTTTGGGGAAATATAGCGACTTATTTGGAACCA
GCGGATCAGCAATTTCTTTTGGTCAGGGAAAAGGACATTGTTGCTTTAATCCAAAAGGCTAAAAGACGAGCTCTTTTCTT
TTGGGGAACTTGGCAGACACTCTTGCTTCTTATTTTGGCACCTCTTTTTTTACGTTTGGGACTGGCACTTTTTTCTTTTC
TTTTTTTGCTCCTTTTTTTGCTCTTTTTAAAGGGATTAATCATTGAAAAAAAAAGCAGAGCTTTTTTGAAGCAGAAAGGA
CTGAACTGGGATCATGCTCTTAATCAAGAGAAAAAACGGCAGCAGGCAATTTTAAAATTCTTTTCACTTTTTACCAATGT
TAAGGGAATTTCAAACAGCGTTAAGCGACGGGCTTATTTGGATTTTGGGACAAAATTATTGCCGAAGGAGACTCATAAAG
CGTGGACTAATCTTTATTTAAGAGCTTTTTTACGTAGTGGCGATTATTTAGGACTGACCTTTCGTTTAGGTTTTTTAAGT
CTTTTAAGTCTTCTTTTTATTGATAATCCTTTAATGTCAGCAGGTTTAGCGCTCCTTTTTAATTACCTCTTGCTTTTTCA
ATTGTTGGCTCTTTATAAACATTATGATTATCAATATTTAACAGCCCTTTTTCCCATTTCAAAAGCGGAGAAGAAGGCTA
ATTTGAAACAGTTATTGCGTGTTATTCTATATTTTCTAACAGCTGTTGAATTTTGTTTTAGCTTTTCATGGCAAAAGACA
ATTATTTTACTTTTGGCAATGCTTTGTCTCAATGAAGTTTATCTGCCTTACAAAATAAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-155)

Bacterial ABC transporter protein EcsB (EcsB)

(157-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

51.453

100

0.515
  pptB Streptococcus thermophilus LMD-9

50.872

100

0.509