Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HB752_RS02535 Genome accession   NZ_CP050271
Coordinates   487234..488037 (+) Length   267 a.a.
NCBI ID   WP_019804853.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 482234..493037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS02510 (HB752_02510) - 482519..483223 (-) 705 WP_002266143.1 amino acid ABC transporter permease -
  HB752_RS02515 (HB752_02515) - 483241..484053 (-) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  HB752_RS02520 (HB752_02520) - 484050..484832 (-) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  HB752_RS02525 (HB752_02525) vicR 485185..485892 (+) 708 WP_002262930.1 response regulator YycF Regulator
  HB752_RS02530 (HB752_02530) vicK 485885..487237 (+) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  HB752_RS02535 (HB752_02535) vicX 487234..488037 (+) 804 WP_019804853.1 MBL fold metallo-hydrolase Regulator
  HB752_RS02540 (HB752_02540) rnc 488144..488839 (+) 696 WP_002266141.1 ribonuclease III -
  HB752_RS02545 (HB752_02545) smc 488839..492375 (+) 3537 WP_019804852.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29737.82 Da        Isoelectric Point: 6.1184

>NTDB_id=431114 HB752_RS02535 WP_019804853.1 487234..488037(+) (vicX) [Streptococcus mutans strain S1]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDSMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMIRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=431114 HB752_RS02535 WP_019804853.1 487234..488037(+) (vicX) [Streptococcus mutans strain S1]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATAGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGATTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.251

100

0.993