Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   HBA50_RS07525 Genome accession   NZ_CP050133
Coordinates   1507095..1508405 (-) Length   436 a.a.
NCBI ID   WP_045498968.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502095..1513405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS07505 (HBA50_07505) - 1502538..1503392 (-) 855 WP_045498974.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  HBA50_RS07510 (HBA50_07510) - 1503532..1503762 (-) 231 WP_005592360.1 DUF1797 family protein -
  HBA50_RS07515 (HBA50_07515) clpE 1504004..1506277 (+) 2274 WP_045498971.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  HBA50_RS07520 (HBA50_07520) - 1506363..1506767 (+) 405 Protein_1471 transposase -
  HBA50_RS07525 (HBA50_07525) scnK 1507095..1508405 (-) 1311 WP_045498968.1 sensor histidine kinase KdpD Regulator
  HBA50_RS07530 (HBA50_07530) scnR 1508406..1509095 (-) 690 WP_045498965.1 response regulator transcription factor Regulator
  HBA50_RS07535 (HBA50_07535) - 1509267..1510175 (+) 909 WP_008809655.1 ABC transporter ATP-binding protein -
  HBA50_RS07540 (HBA50_07540) - 1510175..1510915 (+) 741 WP_045498958.1 ABC transporter permease -
  HBA50_RS07545 (HBA50_07545) - 1510912..1511640 (+) 729 WP_045498955.1 ABC transporter permease -
  HBA50_RS07550 (HBA50_07550) - 1511756..1513012 (-) 1257 WP_045499770.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49995.96 Da        Isoelectric Point: 9.2302

>NTDB_id=430230 HBA50_RS07525 WP_045498968.1 1507095..1508405(-) (scnK) [Streptococcus cristatus ATCC 51100]
MDTVKFFTKLLTRYVLLILALIIGLVFVYGLVFSAYFSFYGKEKPELLYTKIAQSSQENNFNFDKSSKIEMDKQNTWAMV
LNQDGNIVQSYHLPKGLKKHYTNADMVKFSRWYLEDYPVFSYVRGQQILVLGYPKKHSLAKFNFYANTQFIRNFLSLGLV
FLGIILLLIFILLSRSKLRIKKEMEPIITAVTSLSQGQNIVLKEKGNFSEIKTALNETSHILEESNTMKEQWIRGVSHDL
RNPLMLISGYNSQLEQQYGKGKQTEEIENQIQTMKEMISNLNMSYLLDNQKRHSEFSNLDLVTVLRTVIADILNNYETIT
LHFDLPAETVLVKGEVTLLARAFRNLLLNSIMHSGSNQIDLTYQLSDNKVLIVIADQGDITAQKITELNQKSTNYESHGM
GTVITKQIIKLHQGEIVFLDNHPGLKVTISLPLVKE

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=430230 HBA50_RS07525 WP_045498968.1 1507095..1508405(-) (scnK) [Streptococcus cristatus ATCC 51100]
ATGGATACCGTTAAATTTTTTACTAAGTTATTAACCAGGTATGTTCTATTAATCTTGGCTTTAATCATAGGACTTGTTTT
TGTTTATGGTTTGGTTTTCTCAGCCTATTTTAGTTTCTATGGAAAGGAAAAACCGGAACTACTTTACACTAAAATCGCTC
AATCGAGTCAAGAGAATAATTTCAATTTTGATAAAAGCAGCAAAATTGAAATGGATAAACAAAATACTTGGGCTATGGTA
CTGAATCAAGATGGCAATATTGTCCAATCTTATCATTTACCTAAAGGACTCAAAAAGCATTATACGAATGCTGATATGGT
TAAATTTTCACGTTGGTATTTAGAAGATTACCCTGTTTTCTCCTATGTACGTGGTCAGCAAATTTTAGTTTTGGGCTATC
CTAAAAAGCATTCCTTAGCAAAATTTAATTTCTATGCTAATACGCAATTTATTAGGAATTTTCTCAGTTTGGGACTTGTT
TTCTTGGGTATTATTCTTTTACTTATTTTTATTCTTTTGAGCCGATCAAAGTTGCGTATTAAAAAGGAGATGGAGCCGAT
TATTACTGCTGTCACTTCTTTATCTCAAGGTCAAAATATCGTTCTTAAAGAAAAGGGAAATTTCTCTGAAATTAAGACGG
CTCTCAATGAGACATCTCATATTTTGGAAGAAAGCAACACGATGAAAGAGCAATGGATTAGAGGGGTCAGTCATGATTTA
CGCAATCCTCTTATGCTCATATCAGGTTATAACAGTCAGTTAGAGCAGCAATATGGCAAAGGAAAGCAGACAGAGGAAAT
TGAAAATCAGATTCAAACTATGAAAGAAATGATTTCTAATCTCAATATGAGCTACTTATTGGATAACCAAAAGCGTCACT
CCGAATTTTCCAATCTTGATTTGGTTACTGTCCTACGAACAGTAATTGCCGATATATTGAATAATTATGAAACAATTACA
CTTCATTTTGATTTGCCTGCCGAGACAGTGTTGGTAAAAGGAGAGGTAACTTTATTAGCAAGAGCTTTTAGAAATCTCTT
ACTTAATAGTATTATGCACAGCGGCTCTAACCAGATTGATCTGACTTATCAATTATCTGATAATAAAGTGCTCATCGTCA
TTGCGGATCAAGGAGATATTACAGCTCAAAAAATTACTGAGCTAAATCAAAAATCAACTAATTATGAATCACATGGTATG
GGAACAGTTATCACCAAACAAATTATTAAATTACATCAAGGTGAAATTGTTTTTTTAGACAATCATCCAGGCTTAAAAGT
CACCATTTCTTTACCTTTAGTAAAGGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(337-433)

His Kinase A (phospho-acceptor) domain (HisKA)

(228-281)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

82.11

100

0.821