Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HAP36_RS02090 Genome accession   NZ_CP050053
Coordinates   449155..449562 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain LIUYANG-C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 444155..454562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HAP36_RS02060 - 444203..445207 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  HAP36_RS02065 pyrR 445231..445743 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HAP36_RS02070 ruvX 445855..446289 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HAP36_RS02075 - 446289..446858 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  HAP36_RS02080 - 446907..447800 (-) 894 WP_003114892.1 energy transducer TonB -
  HAP36_RS02085 gshB 447947..448900 (-) 954 WP_003100943.1 glutathione synthase -
  HAP36_RS02090 pilG 449155..449562 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HAP36_RS02095 pilH 449609..449974 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  HAP36_RS02100 - 450025..450561 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  HAP36_RS02105 pilJ 450646..452694 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  HAP36_RS02110 pilK 452755..453630 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=429769 HAP36_RS02090 WP_003084583.1 449155..449562(+) (pilG) [Pseudomonas aeruginosa strain LIUYANG-C]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=429769 HAP36_RS02090 WP_003084583.1 449155..449562(+) (pilG) [Pseudomonas aeruginosa strain LIUYANG-C]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385