Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BDGL_000953 | Genome accession | NC_016603 |
| Coordinates | 1001920..1002300 (+) | Length | 126 a.a. |
| NCBI ID | YP_004995221.1 | Uniprot ID | F0KMC8 |
| Organism | Acinetobacter pittii PHEA-2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 996920..1007300
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BDGL_000947 | kdsB | 997826..998587 (+) | 762 | YP_004995215.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BDGL_000948 | holB | 998601..999581 (+) | 981 | YP_004995216.1 | DNA polymerase III subunit delta' | - |
| BDGL_000949 | pilZ | 999592..999933 (+) | 342 | YP_004995217.1 | type 4 fimbrial biogenesis protein | - |
| BDGL_000950 | ycfH | 999951..1000724 (+) | 774 | YP_004995218.1 | putative deoxyribonuclease | - |
| BDGL_000951 | - | 1000761..1001369 (+) | 609 | YP_004995219.1 | hypothetical protein | - |
| BDGL_000952 | - | 1001376..1001930 (+) | 555 | YP_004995220.1 | putative general secretion pathway protein G precursor | - |
| BDGL_000953 | xcpV | 1001920..1002300 (+) | 381 | YP_004995221.1 | general type II secretion pathway protein I precursor (PilD-dependent protein PddC) | Machinery gene |
| BDGL_000954 | xcpW | 1002300..1003055 (+) | 756 | YP_004995222.1 | general secretion pathway protein J | Machinery gene |
| BDGL_000955 | xcpX | 1003056..1004015 (+) | 960 | YP_004995223.1 | general secretion pathway protein K | - |
| BDGL_000956 | - | 1004244..1004840 (+) | 597 | YP_004995224.1 | 6-pyruvoyl-tetrahydropterin synthase | - |
| BDGL_000957 | ung | 1004894..1005607 (+) | 714 | YP_004995225.1 | uracil-DNA glycosylase | - |
| BDGL_000958 | hibch | 1005604..1006728 (+) | 1125 | YP_004995226.1 | putative enoyl-CoA hydratase/isomerase | - |
| BDGL_000959 | yfhC | 1006734..1007237 (+) | 504 | YP_004995227.1 | tRNA-specific adenosine deaminase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=42966 BDGL_000953 YP_004995221.1 1001920..1002300(+) (xcpV) [Acinetobacter pittii PHEA-2]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=42966 BDGL_000953 YP_004995221.1 1001920..1002300(+) (xcpV) [Acinetobacter pittii PHEA-2]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCATTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCATTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |