Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GTCCBUS3UF5_RS12540 | Genome accession | NC_016593 |
| Coordinates | 2522136..2523209 (-) | Length | 357 a.a. |
| NCBI ID | WP_011231917.1 | Uniprot ID | Q5KX66 |
| Organism | Geobacillus thermoleovorans CCB_US3_UF5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2517136..2528209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTCCBUS3UF5_RS12500 (GTCCBUS3UF5_27400) | - | 2517863..2518657 (+) | 795 | WP_011231909.1 | YqhG family protein | - |
| GTCCBUS3UF5_RS12505 (GTCCBUS3UF5_27410) | - | 2518760..2518939 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| GTCCBUS3UF5_RS12510 (GTCCBUS3UF5_27420) | comGG | 2518986..2519375 (-) | 390 | WP_014196338.1 | competence type IV pilus minor pilin ComGG | - |
| GTCCBUS3UF5_RS12515 (GTCCBUS3UF5_27430) | comGF | 2519450..2519896 (-) | 447 | WP_014196339.1 | competence type IV pilus minor pilin ComGF | - |
| GTCCBUS3UF5_RS12520 (GTCCBUS3UF5_27440) | - | 2519875..2520201 (-) | 327 | WP_011231913.1 | type II secretion system protein | - |
| GTCCBUS3UF5_RS12525 (GTCCBUS3UF5_27450) | comGD | 2520185..2520622 (-) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| GTCCBUS3UF5_RS12530 (GTCCBUS3UF5_27460) | comGC | 2520612..2520908 (-) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GTCCBUS3UF5_RS12535 (GTCCBUS3UF5_27470) | comGB | 2521111..2522139 (-) | 1029 | WP_014196341.1 | competence type IV pilus assembly protein ComGB | - |
| GTCCBUS3UF5_RS12540 (GTCCBUS3UF5_27480) | comGA | 2522136..2523209 (-) | 1074 | WP_011231917.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GTCCBUS3UF5_RS12545 (GTCCBUS3UF5_27490) | - | 2523402..2524100 (+) | 699 | WP_011231918.1 | helix-turn-helix transcriptional regulator | - |
| GTCCBUS3UF5_RS12550 (GTCCBUS3UF5_27500) | - | 2524259..2524501 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| GTCCBUS3UF5_RS12555 (GTCCBUS3UF5_27510) | - | 2524585..2525718 (-) | 1134 | WP_020278526.1 | class I SAM-dependent methyltransferase | - |
| GTCCBUS3UF5_RS12560 (GTCCBUS3UF5_27520) | - | 2526039..2526671 (-) | 633 | WP_014196343.1 | MBL fold metallo-hydrolase | - |
| GTCCBUS3UF5_RS18570 (GTCCBUS3UF5_27540) | - | 2526841..2527017 (+) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39570.00 Da Isoelectric Point: 8.7901
>NTDB_id=42890 GTCCBUS3UF5_RS12540 WP_011231917.1 2522136..2523209(-) (comGA) [Geobacillus thermoleovorans CCB_US3_UF5]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=42890 GTCCBUS3UF5_RS12540 WP_011231917.1 2522136..2523209(-) (comGA) [Geobacillus thermoleovorans CCB_US3_UF5]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCTTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCTTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.725 |
96.639 |
0.49 |