Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   G8D99_RS03610 Genome accession   NZ_CP049916
Coordinates   771732..776141 (+) Length   1469 a.a.
NCBI ID   WP_166322727.1    Uniprot ID   A0A6G8S1W6
Organism   Acinetobacter lanii strain 185     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 766732..781141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS03585 (G8D99_03585) - 767240..767797 (-) 558 WP_166327488.1 hypothetical protein -
  G8D99_RS03590 (G8D99_03590) pilG 768161..768544 (+) 384 WP_166322719.1 twitching motility response regulator PilG Regulator
  G8D99_RS03595 (G8D99_03595) - 768569..768937 (+) 369 WP_166322721.1 response regulator -
  G8D99_RS03600 (G8D99_03600) - 768941..769477 (+) 537 WP_166322723.1 chemotaxis protein CheW -
  G8D99_RS03605 (G8D99_03605) - 769521..771581 (+) 2061 WP_166322725.1 methyl-accepting chemotaxis protein -
  G8D99_RS03610 (G8D99_03610) chpA 771732..776141 (+) 4410 WP_166322727.1 Hpt domain-containing protein Regulator
  G8D99_RS03615 (G8D99_03615) - 776151..776612 (+) 462 WP_166322729.1 hypothetical protein -
  G8D99_RS03620 (G8D99_03620) dapE 776694..777827 (-) 1134 WP_166322731.1 succinyl-diaminopimelate desuccinylase -
  G8D99_RS03625 (G8D99_03625) - 778011..778160 (-) 150 WP_166327490.1 entericidin A/B family lipoprotein -
  G8D99_RS03630 (G8D99_03630) - 778279..779124 (-) 846 WP_166322733.1 DUF1853 family protein -
  G8D99_RS03635 (G8D99_03635) - 779231..779632 (+) 402 WP_166322735.1 YbaN family protein -
  G8D99_RS03640 (G8D99_03640) elsL 779961..780461 (+) 501 WP_166322737.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1469 a.a.        Molecular weight: 164934.11 Da        Isoelectric Point: 4.4506

>NTDB_id=428635 G8D99_RS03610 WP_166322727.1 771732..776141(+) (chpA) [Acinetobacter lanii strain 185]
MKQILKHLVEKTELPEDHYLDQDAEILEIFVEELEEIFENLQPLLDQWMANPAQDDVLVTIRRNFHTLKGSGRMVGAKSS
GELAWTVEDTLNRVIAKNVELTPTLQRYVRAVFNLYQYKLFHDFKNTQAHDQDFRPLVLLGQQLQQNLSLDPALEELLDL
SEQLNHVDVITGMERGVKEPSSITQDAPIEQVEPIQHIESFEFTPSKTALEATESDSLLSETVTIFIEESEDHLQTLDQF
IQVPNHSAEQYNQLIRALHTLRGSSSMAHVDDIFDASGKVEHLFRSLLKEDTETSVNENALLSQYVHYVRDYLHALKSSN
TSKQQFAEIQQKFDDAWARYDFQIANVEQSDQSQSLVSELVNLQIDQLLDTELEFDKRAQSEYPEYFRTLSAQAQLLIEH
TNNRAAMGIREYTQSLKACYDAVLQHFSLLNTNYVYELFASVHQEFIHLFDTLAAGQRVGLSIQALQAMDELKAYLQQDI
EGVDQFSDLSVASWSSNETNASSHSLDSAHVSAQIAADKQFIHDEQARREFDPDVLDIFLDEAEELLGFIDQDLNTWSAE
PGNTKALNNLMRHLHTLKGGANMLQAEHIGSIAHELESIYERIINNHMTVSQDLIDAIRLVQDDVADRLQMIRDEQVDYP
APYTISLLQFIADPNVKDQYVAASPSTTDVETTALSSDAVVNDTASTGAGTEDTAEEIAKETFAEEAEELIEEAQGLLKQ
WSDQRSNRSLLLQLQRISHSLKGGAKMVQISKVSDIAYELESAFEQFAVHNFNSNAYDALLASAFTWLKSAILEQNFQYF
DTLKSNLSNIQYVDVSAQLPEKLARTDLLADQYTVEVVEGDGTEPPSMLGEWGEDTQTEQSDEMIRISADLIEKMIDLSG
ENAINRSRIEMDLSQLGNTLTDMELAIQRLADQLRRMEGELESQIIAKHGDLDGRYEDFDPLEMDQYSSLNQLSKSLAES
ASDLVDFKSTLVEKIKDTEGILLQQSRIQAEIQEGLMRARLVPFSRLLPRLQRLVRQVSTTLNKPTELLVNNTEGELDRT
ILEKLVAPLEHMLRNALDHGIESTNQRVNQGKPAQGKIELDISRQGTDIVVAFKDDGQGIDADKIKAKAIELGLLKTEQA
LSNEDILQFIFHPGFSTAEKVTQISGRGVGLDVVQSGIKSLGGQVSVASELGKGSTFTIRVPTTVAVSDALMVKVGDQQF
AVPLAQIDRIVRISPTALDEFFNSDQDYFQIDHQNYKLRYLAEFVAHQPSPKLNGVAHSLPVLLIKGNMGHTVALLVDQL
IGSRSQIVMKPIGDQLASIGAISGATILGDGRVCLILDGQNIARQIQASNRDDAKVEKRDTSRRNDQRHLIMIVDDSVTV
RKVTSRLLERHGYDVVTAKDGLDAIEQLENVKPDLMLLDIEMPRMDGFEVTGLVRHHEVHHDLPIIMITSRTGEKHRDRA
FSLGVTHYMGKPFQEANLLENISAALETK

Nucleotide


Download         Length: 4410 bp        

>NTDB_id=428635 G8D99_RS03610 WP_166322727.1 771732..776141(+) (chpA) [Acinetobacter lanii strain 185]
ATGAAACAAATATTAAAACATTTAGTCGAAAAGACCGAGTTGCCTGAAGATCATTATTTGGATCAGGACGCTGAAATTTT
AGAAATCTTCGTTGAAGAGTTGGAAGAAATTTTTGAAAATTTACAGCCATTGTTAGATCAATGGATGGCTAACCCTGCAC
AAGATGATGTGTTGGTGACGATTCGTCGTAACTTCCATACCTTAAAAGGTTCAGGTCGTATGGTGGGGGCAAAGTCATCA
GGTGAATTGGCATGGACCGTTGAAGATACGCTGAATCGTGTGATTGCCAAAAATGTCGAACTCACTCCAACATTACAACG
CTATGTGCGTGCAGTTTTTAATCTGTATCAATATAAATTATTTCACGATTTTAAAAATACCCAAGCCCATGATCAAGACT
TTCGACCTTTGGTACTTTTAGGTCAGCAATTACAACAAAATTTAAGTCTAGACCCTGCTTTAGAAGAATTATTAGATTTA
TCTGAGCAGTTGAATCATGTTGATGTCATCACAGGCATGGAACGTGGCGTTAAGGAGCCAAGTTCAATTACACAAGATGC
GCCGATTGAACAGGTTGAACCAATTCAACACATTGAAAGCTTTGAGTTTACGCCATCTAAAACAGCACTTGAAGCGACTG
AAAGCGATAGTCTACTGTCTGAAACTGTAACGATCTTTATAGAGGAATCAGAAGATCATTTACAGACCTTGGATCAGTTT
ATTCAAGTGCCGAACCATAGTGCAGAGCAGTACAATCAGTTGATTCGTGCCTTGCATACCTTACGTGGTAGCTCATCTAT
GGCGCATGTCGATGATATTTTTGATGCCAGTGGTAAAGTTGAGCATTTATTCAGGTCATTGCTGAAAGAAGATACAGAAA
CCAGTGTCAATGAAAATGCCTTACTGAGTCAGTATGTGCACTATGTGCGTGATTATTTGCATGCCTTAAAATCATCCAAT
ACGTCAAAGCAACAGTTTGCTGAAATTCAACAGAAATTTGATGATGCTTGGGCGCGTTATGATTTCCAAATTGCCAATGT
AGAGCAATCGGATCAAAGTCAAAGTTTGGTCAGTGAATTGGTGAATTTGCAGATCGACCAATTACTCGATACTGAACTTG
AATTCGATAAACGTGCACAGTCAGAGTATCCTGAATATTTCAGAACCTTGAGTGCGCAAGCGCAATTATTGATTGAGCAT
ACCAATAACCGCGCGGCGATGGGGATTCGTGAATACACCCAATCTTTAAAAGCGTGTTACGACGCAGTGTTGCAACATTT
TAGCTTACTCAATACCAACTATGTGTATGAGCTTTTTGCCAGTGTGCATCAAGAGTTTATCCACTTATTTGATACCTTGG
CGGCAGGACAACGTGTAGGGCTTAGTATCCAAGCGTTGCAAGCGATGGATGAACTGAAAGCGTATCTACAACAAGATATT
GAAGGTGTTGATCAGTTTAGTGATCTATCAGTTGCGTCATGGTCATCGAATGAAACAAACGCGTCATCGCATTCGCTTGA
TTCTGCACATGTCTCTGCACAAATTGCAGCAGACAAACAGTTCATTCATGATGAACAAGCTCGCCGTGAATTTGATCCGG
ATGTGTTGGATATTTTCCTGGATGAAGCAGAAGAGTTACTCGGCTTTATTGATCAAGACCTAAATACTTGGTCCGCTGAG
CCGGGAAATACCAAAGCACTGAATAACTTGATGCGTCATTTGCATACCCTGAAAGGGGGCGCCAATATGCTTCAGGCAGA
ACATATTGGCTCCATTGCACATGAACTTGAAAGCATTTATGAGCGCATTATCAATAATCATATGACCGTGAGTCAGGATT
TGATTGATGCCATTCGATTGGTGCAGGACGATGTCGCTGACCGTTTACAAATGATTCGTGACGAACAAGTTGATTATCCA
GCGCCTTATACCATTTCACTTCTACAATTTATTGCTGATCCGAATGTGAAAGATCAGTATGTTGCAGCATCACCATCAAC
AACAGATGTTGAAACAACTGCATTGTCTTCTGATGCAGTTGTAAATGATACGGCATCAACAGGAGCGGGCACAGAAGACA
CTGCTGAAGAGATCGCCAAAGAGACCTTTGCTGAAGAAGCTGAAGAGCTGATTGAAGAAGCACAAGGACTATTAAAACAA
TGGAGCGATCAGCGCAGTAACCGTAGTTTATTATTGCAATTACAACGCATTTCGCACAGTCTCAAAGGCGGTGCGAAGAT
GGTTCAAATCAGTAAAGTCTCAGACATTGCGTATGAACTTGAGTCAGCTTTTGAACAGTTTGCGGTACATAATTTTAACT
CAAATGCCTATGACGCCTTATTAGCGTCTGCATTTACTTGGTTGAAATCAGCAATTCTTGAGCAGAACTTCCAGTACTTT
GACACACTAAAAAGTAATTTAAGCAACATTCAGTATGTCGATGTCTCTGCTCAATTGCCGGAAAAATTGGCGCGTACCGA
TTTACTCGCAGATCAATACACGGTTGAAGTGGTTGAAGGTGATGGTACCGAGCCACCATCGATGCTGGGTGAATGGGGCG
AAGATACCCAAACTGAGCAAAGCGATGAGATGATTCGGATCTCAGCTGATCTGATTGAAAAAATGATCGATCTTTCAGGT
GAGAATGCGATTAACCGCTCACGCATTGAAATGGACTTAAGTCAACTCGGCAATACTTTGACCGATATGGAGCTTGCGAT
TCAACGTTTGGCGGATCAGTTGCGTCGAATGGAAGGGGAACTTGAGTCACAGATTATTGCCAAACATGGTGACTTGGATG
GCCGATATGAAGACTTTGACCCATTGGAAATGGATCAATATTCATCATTGAATCAGTTATCTAAATCCCTAGCTGAGTCT
GCATCGGATTTGGTTGATTTCAAATCTACTTTGGTTGAAAAAATCAAAGACACTGAAGGCATTTTATTACAACAGTCACG
TATTCAAGCCGAAATCCAAGAAGGTTTAATGCGTGCACGTTTGGTGCCTTTCTCTCGACTATTGCCACGTCTGCAACGCT
TAGTTCGACAGGTTTCAACCACATTGAACAAGCCAACAGAATTATTGGTCAACAACACCGAAGGCGAGCTGGATCGTACC
ATTTTAGAGAAATTGGTTGCTCCACTTGAACACATGTTACGTAATGCACTCGATCATGGGATTGAAAGCACCAATCAACG
TGTCAATCAGGGCAAGCCTGCACAAGGTAAGATTGAACTGGATATCAGCCGTCAAGGCACGGATATCGTGGTGGCCTTTA
AAGATGATGGTCAGGGGATTGATGCCGACAAGATCAAAGCCAAAGCCATTGAACTCGGGTTATTAAAAACCGAGCAAGCC
TTGTCAAATGAAGATATTTTACAATTCATTTTCCATCCCGGTTTCTCAACCGCAGAGAAAGTCACCCAGATTTCAGGTCG
TGGTGTCGGATTGGATGTGGTGCAAAGTGGCATTAAGTCGTTGGGTGGTCAAGTGTCGGTTGCATCTGAACTCGGCAAAG
GTTCGACCTTTACCATTCGCGTACCAACCACGGTAGCGGTGAGTGATGCCTTGATGGTGAAAGTCGGCGATCAACAGTTC
GCTGTACCGTTGGCGCAGATCGACCGTATTGTACGTATTTCACCAACCGCTTTGGATGAGTTCTTCAACAGTGATCAAGA
TTATTTCCAAATTGATCATCAAAATTACAAGCTACGTTATCTGGCAGAATTTGTCGCGCATCAGCCTTCACCTAAGTTGA
ATGGTGTGGCACATTCATTGCCGGTGTTGCTGATTAAAGGCAATATGGGGCATACCGTTGCCTTGTTGGTGGACCAATTG
ATTGGTTCACGTTCTCAAATTGTGATGAAGCCGATTGGTGACCAATTGGCTTCAATCGGCGCGATTTCTGGTGCCACCAT
TTTGGGTGATGGGCGCGTTTGCTTGATTTTGGATGGACAAAATATTGCCCGCCAAATCCAAGCCAGCAATCGTGATGATG
CCAAGGTTGAAAAACGAGACACCTCACGTCGCAATGATCAACGCCATTTGATTATGATCGTGGATGACTCTGTAACGGTG
CGTAAAGTCACTTCGCGCTTACTTGAGCGTCATGGTTATGATGTGGTGACCGCCAAAGACGGTCTAGATGCAATTGAGCA
ACTCGAAAATGTCAAACCAGATCTGATGTTGCTGGATATCGAAATGCCACGTATGGACGGTTTTGAGGTGACGGGCTTGG
TGCGCCATCATGAGGTGCATCATGATCTTCCGATTATTATGATTACTTCACGAACCGGCGAAAAACATCGTGATCGTGCG
TTCAGTTTAGGCGTGACTCACTATATGGGTAAACCATTCCAAGAAGCGAACTTGCTAGAGAATATCTCTGCGGCACTGGA
AACCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

58.476

100

0.606