Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V753_RS02020 Genome accession   NZ_CP049904
Coordinates   398035..398988 (+) Length   317 a.a.
NCBI ID   WP_007609397.1    Uniprot ID   -
Organism   Bacillus velezensis strain GB03     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 393035..403988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V753_RS01995 (V753_01985) - 393081..394514 (+) 1434 WP_161631122.1 sensor histidine kinase -
  V753_RS02000 (V753_01990) rapC 394667..395815 (+) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  V753_RS02005 (V753_01995) phrC 395799..395918 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  V753_RS02010 (V753_02000) - 396067..396177 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  V753_RS02015 (V753_02005) - 396257..397621 (-) 1365 WP_007609394.1 aspartate kinase -
  V753_RS02020 (V753_02010) ceuB 398035..398988 (+) 954 WP_007609397.1 ABC transporter permease Machinery gene
  V753_RS02025 (V753_02015) - 398978..399925 (+) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  V753_RS02030 (V753_02020) - 399919..400677 (+) 759 WP_007609404.1 ABC transporter ATP-binding protein -
  V753_RS02035 (V753_02025) - 400699..401643 (+) 945 WP_007609406.1 siderophore ABC transporter substrate-binding protein -
  V753_RS02040 (V753_02030) - 401685..403109 (-) 1425 WP_007609408.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=428472 V753_RS02020 WP_007609397.1 398035..398988(+) (ceuB) [Bacillus velezensis strain GB03]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSINLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=428472 V753_RS02020 WP_007609397.1 398035..398988(+) (ceuB) [Bacillus velezensis strain GB03]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATTCTCGAGAGGATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCATCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTTATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGAGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533