Detailed information NTG0427828

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G4D77_RS09885
• Genome accession: NZ_CP049795
• Coordinates: 2152954..2154174 (+)
• Length: 406 a.a.
• NCBI ID: WP_016449076.1
• Uniprot ID: A0AAU0LD35
• Organism: Delftia sp. WY8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2147954..2159174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4D77_RS09865	coaD	2148724..2149224 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
G4D77_RS09870	rsmD	2149355..2150062 (-)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G4D77_RS09875	-	2150059..2151420 (-)	1362	WP_046985885.1	pitrilysin family protein	-
G4D77_RS09880	-	2151447..2152925 (-)	1479	WP_026062084.1	pitrilysin family protein	-
G4D77_RS09885	pilA	2152954..2154174 (+)	1221	WP_016449076.1	signal recognition particle-docking protein FtsY	Machinery gene
G4D77_RS09890	-	2154429..2155418 (+)	990	WP_154835407.1	tripartite tricarboxylate transporter substrate binding protein	-
G4D77_RS09895	cutA	2155405..2155803 (-)	399	WP_154835409.1	divalent-cation tolerance protein CutA	-
G4D77_RS09900	-	2155856..2156881 (-)	1026	WP_017404218.1	2-dehydropantoate 2-reductase	-
G4D77_RS09905	-	2156900..2157658 (-)	759	WP_016449082.1	class II aldolase/adducin family protein	-
G4D77_RS09910	-	2157726..2158271 (-)	546	WP_016454136.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42448.31 Da
• Isoelectric Point: 5.5266

>NTDB_id=427828 G4D77_RS09885 WP_016449076.1 2152954..2154174(+) (pilA) [Delftia sp. WY8]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=427828 G4D77_RS09885 WP_016449076.1 2152954..2154174(+) (pilA) [Delftia sp. WY8]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGTTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGACCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCCGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502