Detailed information NTG0042744

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SMULJ23_RS09755
• Genome accession: NC_017768
• Coordinates: 2002098..2003189 (+)
• Length: 363 a.a.
• NCBI ID: WP_014678315.1
• Uniprot ID: -
• Organism: Streptococcus mutans LJ23
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1997098..2008189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMULJ23_RS09730 (SMULJ23_1908)	pgsA	1997506..1998048 (-)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SMULJ23_RS09735 (SMULJ23_1909)	-	1998060..1999037 (-)	978	WP_002270375.1	helix-turn-helix domain-containing protein	-
SMULJ23_RS09740 (SMULJ23_1910)	-	1999110..2000402 (-)	1293	WP_014678314.1	pitrilysin family protein	-
SMULJ23_RS09745 (SMULJ23_1911)	-	2000404..2001651 (-)	1248	WP_002266407.1	pitrilysin family protein	-
SMULJ23_RS09750 (SMULJ23_1912)	yaaA	2001730..2002095 (+)	366	WP_002262455.1	S4 domain-containing protein YaaA	-
SMULJ23_RS09755 (SMULJ23_1913)	recF	2002098..2003189 (+)	1092	WP_014678315.1	DNA replication/repair protein RecF	Machinery gene
SMULJ23_RS09760 (SMULJ23_1914)	guaB	2003352..2004833 (-)	1482	WP_002262457.1	IMP dehydrogenase	-
SMULJ23_RS09765 (SMULJ23_1915)	trpS	2004990..2006012 (-)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
SMULJ23_RS09770 (SMULJ23_1916)	-	2006447..2008066 (+)	1620	WP_002293278.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42069.31 Da
• Isoelectric Point: 9.8334

>NTDB_id=42744 SMULJ23_RS09755 WP_014678315.1 2002098..2003189(+) (recF) [Streptococcus mutans LJ23]
MWIEKINLKHYRNYTAIESEFSQNLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNANFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=42744 SMULJ23_RS09755 WP_014678315.1 2002098..2003189(+) (recF) [Streptococcus mutans LJ23]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAATCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAACTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.722	99.174	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446