Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   IF736_RS04020 Genome accession   NZ_CP062350
Coordinates   787630..788916 (-) Length   428 a.a.
NCBI ID   WP_047928435.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_250     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 782630..793916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF736_RS04015 (IF736_04000) - 785907..787610 (-) 1704 WP_000814091.1 proline--tRNA ligase -
  IF736_RS04020 (IF736_04005) eeP 787630..788916 (-) 1287 WP_047928435.1 RIP metalloprotease RseP Regulator
  IF736_RS04025 (IF736_04010) - 789103..789885 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  IF736_RS04030 (IF736_04015) - 789892..790662 (-) 771 WP_000473705.1 isoprenyl transferase -
  IF736_RS04035 (IF736_04020) frr 791035..791589 (-) 555 WP_001280006.1 ribosome recycling factor -
  IF736_RS04040 (IF736_04025) pyrH 791608..792330 (-) 723 WP_000057330.1 UMP kinase -
  IF736_RS04045 (IF736_04030) tsf 792467..793348 (-) 882 WP_000201387.1 translation elongation factor Ts -
  IF736_RS04050 (IF736_04035) - 793383..793496 (-) 114 WP_001789890.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48117.50 Da        Isoelectric Point: 9.5402

>NTDB_id=426862 IF736_RS04020 WP_047928435.1 787630..788916(-) (eeP) [Staphylococcus aureus strain NAS_AN_250]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEESEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLHKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=426862 IF736_RS04020 WP_047928435.1 787630..788916(-) (eeP) [Staphylococcus aureus strain NAS_AN_250]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAGTGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACATAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCGTTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATAATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(9-413)

(191-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395