Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   TEH_RS09550 Genome accession   NC_016052
Coordinates   1965531..1966796 (-) Length   421 a.a.
NCBI ID   WP_014125330.1    Uniprot ID   -
Organism   Tetragenococcus halophilus NBRC 12172     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1960531..1971796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TEH_RS09545 (TEH_19610) - 1963740..1965446 (-) 1707 WP_014125329.1 proline--tRNA ligase -
  TEH_RS09550 (TEH_19620) eeP 1965531..1966796 (-) 1266 WP_014125330.1 RIP metalloprotease RseP Regulator
  TEH_RS09555 (TEH_19630) - 1966948..1967754 (-) 807 WP_014125331.1 phosphatidate cytidylyltransferase -
  TEH_RS09560 (TEH_19640) - 1967751..1968551 (-) 801 WP_014125332.1 isoprenyl transferase -
  TEH_RS09565 (TEH_19650) frr 1968983..1969540 (-) 558 WP_014125333.1 ribosome recycling factor -
  TEH_RS09570 (TEH_19660) pyrH 1969544..1970263 (-) 720 WP_041591846.1 UMP kinase -
  TEH_RS09575 (TEH_19670) tsf 1970478..1971359 (-) 882 WP_014125335.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46175.92 Da        Isoelectric Point: 4.1637

>NTDB_id=42666 TEH_RS09550 WP_014125330.1 1965531..1966796(-) (eeP) [Tetragenococcus halophilus NBRC 12172]
MKTLITFLIVFSVVVVIHEFGHFYFAKKSGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEDEEELKAG
MPVSLEVNENNEVIKINTSSKVQLENAIPLEVTRYDLTEALEITGFVNGNEDNVASYSVNHEAMIIEEDGTQLRIAPSDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIAIVFLQGGVPNEDSTVLGEVDSEGVAATAGLRSGDEIVAIDQEEVSSWPE
LQQTIQQQPDEELSLEVNRDDQTFSVDATPESVESGNQDIGQLGVQASLKTGFWDKVVGGVKESWHMLVQILAALRNLVT
NFSLDQLGGPVAIFQMSDQAAQQGAMTVLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAIRGKPISEEKEGMITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=42666 TEH_RS09550 WP_014125330.1 1965531..1966796(-) (eeP) [Tetragenococcus halophilus NBRC 12172]
ATGAAGACATTGATTACATTTTTAATCGTCTTTTCAGTAGTTGTGGTAATACATGAATTTGGACATTTTTATTTTGCTAA
GAAATCGGGCATTTTAGTCCGTGAATTTTCTATCGGCATGGGTCCTAAGCTATTCAGCCACCAAGCTAAAGACGGTACGA
CTTATACCATACGAGCCATACCGATGGGTGGTTATGTTCGGATGGCAGGCTATGAGGATGAAGAAGAACTAAAAGCTGGA
ATGCCGGTATCTTTGGAAGTAAATGAGAATAACGAAGTCATTAAAATCAATACAAGTTCAAAAGTACAGTTAGAAAATGC
GATCCCTTTAGAAGTGACTCGTTATGATTTGACTGAGGCGCTTGAAATTACAGGATTTGTTAATGGAAATGAAGATAATG
TAGCAAGCTATTCAGTAAATCATGAGGCAATGATTATTGAAGAAGACGGTACACAGCTGCGTATTGCACCTAGTGATGTA
CAGTTTCAGTCTGCTAAGTTATGGCAAAGAATGTTGACAAATTTCGCGGGACCTATGAATAATTTCTTATTAACGATTGT
GTTATTCATTGCCATTGTATTTTTACAAGGTGGAGTTCCTAATGAAGACTCAACAGTACTTGGTGAAGTAGATTCTGAAG
GTGTAGCAGCAACAGCCGGTTTAAGGTCGGGGGATGAAATTGTAGCGATCGACCAAGAAGAAGTATCAAGTTGGCCTGAA
CTGCAACAAACGATTCAACAACAACCTGATGAAGAGTTATCGCTTGAAGTTAACCGGGATGACCAAACTTTTTCTGTAGA
TGCAACGCCTGAAAGCGTAGAATCGGGTAATCAAGATATTGGGCAATTGGGCGTACAAGCATCGCTTAAAACTGGTTTTT
GGGACAAAGTAGTAGGCGGTGTGAAAGAAAGTTGGCACATGCTTGTCCAAATTTTAGCTGCCTTAAGAAACTTGGTAACT
AATTTTAGTTTGGATCAATTAGGCGGTCCAGTTGCTATTTTCCAAATGTCTGATCAAGCTGCTCAACAAGGCGCTATGAC
TGTCTTACTTTTGACCGCTATGATATCAGTCAATTTAGGTATCGTGAACTTACTACCCATTCCTGGTTTGGACGGTGGAA
AATTACTACTTAATATAGTCGAAGCTATACGTGGAAAACCAATTAGTGAAGAAAAAGAAGGGATGATTACCTTAGTAGGT
TTTGGTTTGTTGATGTTATTAATGGTATTAGTCACTTGGAATGATATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.168

100

0.52
  eeP Streptococcus thermophilus LMD-9

51.168

100

0.52

Multiple sequence alignment