Detailed information NTG0426545

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C2754_RS07545
• Genome accession: NZ_CP049683
• Coordinates: 1497382..1498272 (+)
• Length: 296 a.a.
• NCBI ID: WP_215279257.1
• Uniprot ID: -
• Organism: Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1492382..1503272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2754_RS07515 (C2754_07515)	pth	1492613..1493203 (+)	591	WP_112208576.1	aminoacyl-tRNA hydrolase	-
C2754_RS07520 (C2754_07520)	-	1493200..1493463 (-)	264	WP_112205456.1	YfhL family 4Fe-4S dicluster ferredoxin	-
C2754_RS07525 (C2754_07525)	coaD	1493482..1493973 (-)	492	WP_112205458.1	pantetheine-phosphate adenylyltransferase	-
C2754_RS07530 (C2754_07530)	rsmD	1494009..1494614 (-)	606	WP_112205460.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C2754_RS07535 (C2754_07535)	-	1494617..1495954 (-)	1338	WP_215273556.1	pitrilysin family protein	-
C2754_RS07540 (C2754_07540)	-	1495951..1497321 (-)	1371	WP_112208578.1	pitrilysin family protein	-
C2754_RS07545 (C2754_07545)	pilA	1497382..1498272 (+)	891	WP_215279257.1	signal recognition particle-docking protein FtsY	Machinery gene
C2754_RS07550 (C2754_07550)	rpoH	1498443..1499306 (+)	864	WP_244973723.1	RNA polymerase sigma factor RpoH	-
C2754_RS07555 (C2754_07555)	-	1499317..1499907 (-)	591	WP_112237267.1	SCO family protein	-
C2754_RS07560 (C2754_07560)	cyoE	1499909..1500802 (-)	894	WP_112208582.1	heme o synthase	-
C2754_RS07565 (C2754_07565)	-	1500799..1501929 (-)	1131	WP_215286041.1	COX15/CtaA family protein	-
C2754_RS07570 (C2754_07570)	-	1501929..1502585 (-)	657	WP_215286042.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31876.61 Da
• Isoelectric Point: 6.4966

>NTDB_id=426545 C2754_RS07545 WP_215279257.1 1497382..1498272(+) (pilA) [Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5]
MLGLRKTLGSLFKSSRIDEAWFDTLEDSLIQSDVGMPTCMQLMASLRQAAKSEKVQDSETLQALLIQELTRLLQALEAHP
NPIFEHQSSHHPEIWLIVGVNGAGKTTTIGKLCKQFQSQGKSILLAAGDTFRAAARNQLLEWGQRNEVDVIAQESGDAAA
VAHDAIHAAISRKTDILIIDTAGRLATQDHLMEELKKVKRVIAKVLPGAPHHTLLILDGNTGQNGLNQVKAFHEALGLTG
LIVTKLDGTAKGGVICALANTFQNGPKPAVLALGKGEGIEDLIPFNAAEYCAELFN

Nucleotide

• Length: 891 bp

>NTDB_id=426545 C2754_RS07545 WP_215279257.1 1497382..1498272(+) (pilA) [Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5]
ATGCTTGGCCTACGTAAAACCCTCGGATCGCTTTTCAAATCAAGCCGGATTGATGAGGCCTGGTTTGATACTCTCGAAGA
CTCCCTGATTCAGAGTGATGTAGGTATGCCGACGTGCATGCAATTAATGGCCAGCTTACGTCAAGCTGCTAAATCAGAAA
AAGTACAAGACTCAGAAACCCTACAAGCATTATTGATTCAAGAACTCACAAGGCTATTACAAGCATTAGAGGCTCACCCA
AATCCCATCTTTGAACATCAAAGTAGTCATCATCCAGAAATCTGGCTCATTGTTGGTGTCAATGGCGCTGGCAAGACCAC
CACGATTGGTAAGCTCTGCAAACAATTCCAGTCACAAGGAAAGTCCATTCTTCTGGCTGCTGGAGACACTTTCCGTGCCG
CCGCACGTAATCAACTCTTAGAGTGGGGGCAACGCAATGAAGTCGATGTGATTGCCCAAGAAAGTGGCGATGCTGCAGCC
GTGGCACACGATGCTATTCATGCTGCGATTTCTCGTAAGACGGACATATTGATTATTGACACTGCAGGTAGGCTGGCCAC
ACAAGACCATTTGATGGAAGAACTGAAGAAGGTCAAACGCGTCATCGCCAAGGTCCTTCCAGGGGCGCCTCACCACACGC
TATTGATTTTGGATGGCAATACGGGCCAGAATGGTTTAAACCAAGTAAAGGCCTTCCACGAAGCGCTGGGACTCACTGGT
CTGATCGTTACCAAACTCGATGGGACTGCCAAAGGCGGGGTCATTTGCGCTCTTGCCAACACCTTTCAAAATGGCCCCAA
ACCTGCAGTTTTAGCGCTTGGCAAAGGCGAAGGAATCGAGGATCTAATCCCCTTCAATGCTGCAGAATATTGCGCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-69)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.536	98.986	0.51