Detailed information NTG0426129

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: G6536_RS19420
• Genome accession: NZ_CP049330
• Coordinates: 3725587..3726744 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CP6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3720587..3731744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6536_RS19390 (G6536_19625)	-	3720831..3721250 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
G6536_RS19395 (G6536_19630)	comFC	3721309..3722043 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
G6536_RS19400 (G6536_19635)	-	3722000..3722284 (-)	285	WP_003185718.1	competence protein ComFB	-
G6536_RS19405 (G6536_19640)	comFA	3722339..3723733 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
G6536_RS19410 (G6536_19645)	-	3723854..3724696 (-)	843	WP_003185726.1	DegV family protein	-
G6536_RS19415 (G6536_19650)	degU	3724816..3725505 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
G6536_RS19420 (G6536_19655)	degS	3725587..3726744 (-)	1158	WP_003185733.1	histidine kinase	Regulator
G6536_RS19425 (G6536_19660)	-	3726958..3727596 (+)	639	WP_003185736.1	YigZ family protein	-
G6536_RS19430 (G6536_19665)	-	3727611..3728687 (+)	1077	WP_003185737.1	LCP family protein	-
G6536_RS19435 (G6536_19670)	-	3728772..3729146 (-)	375	WP_025806150.1	hypothetical protein	-
G6536_RS19440 (G6536_19675)	-	3729266..3730330 (-)	1065	WP_003185739.1	MraY family glycosyltransferase	-
G6536_RS19445 (G6536_19680)	-	3730461..3731642 (-)	1182	WP_003185740.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=426129 G6536_RS19420 WP_003185733.1 3725587..3726744(-) (degS) [Bacillus licheniformis strain CP6]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=426129 G6536_RS19420 WP_003185733.1 3725587..3726744(-) (degS) [Bacillus licheniformis strain CP6]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894