Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   G6536_RS06420 Genome accession   NZ_CP049330
Coordinates   1276821..1276991 (+) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CP6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1271821..1281991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS06390 (G6536_06490) - 1272696..1273508 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  G6536_RS06395 (G6536_06495) - 1273690..1273869 (+) 180 WP_003180573.1 YjzC family protein -
  G6536_RS06400 (G6536_06500) - 1273933..1274127 (-) 195 WP_009328851.1 YjzD family protein -
  G6536_RS06405 (G6536_06505) - 1274359..1275093 (+) 735 WP_207185310.1 hypothetical protein -
  G6536_RS06410 (G6536_06510) - 1275180..1275755 (+) 576 WP_016885912.1 hypothetical protein -
  G6536_RS06415 (G6536_06515) med 1275842..1276795 (+) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  G6536_RS06420 (G6536_06520) comZ 1276821..1276991 (+) 171 WP_031314537.1 ComZ family protein Regulator
  G6536_RS06425 (G6536_06525) - 1277043..1277282 (-) 240 WP_009328847.1 hypothetical protein -
  G6536_RS06430 (G6536_06530) - 1277452..1278390 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  G6536_RS06435 (G6536_06535) fabF 1278412..1279650 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  G6536_RS06440 (G6536_06540) - 1279738..1280526 (+) 789 WP_080618609.1 DUF2268 domain-containing protein -
  G6536_RS06445 (G6536_06545) - 1280718..1281692 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=426081 G6536_RS06420 WP_031314537.1 1276821..1276991(+) (comZ) [Bacillus licheniformis strain CP6]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=426081 G6536_RS06420 WP_031314537.1 1276821..1276991(+) (comZ) [Bacillus licheniformis strain CP6]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75