Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   G6536_RS06415 Genome accession   NZ_CP049330
Coordinates   1275842..1276795 (+) Length   317 a.a.
NCBI ID   WP_009328848.1    Uniprot ID   A0A415IZV0
Organism   Bacillus licheniformis strain CP6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1270842..1281795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS06385 (G6536_06485) argF 1271708..1272658 (+) 951 WP_020450924.1 ornithine carbamoyltransferase -
  G6536_RS06390 (G6536_06490) - 1272696..1273508 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  G6536_RS06395 (G6536_06495) - 1273690..1273869 (+) 180 WP_003180573.1 YjzC family protein -
  G6536_RS06400 (G6536_06500) - 1273933..1274127 (-) 195 WP_009328851.1 YjzD family protein -
  G6536_RS06405 (G6536_06505) - 1274359..1275093 (+) 735 WP_207185310.1 hypothetical protein -
  G6536_RS06410 (G6536_06510) - 1275180..1275755 (+) 576 WP_016885912.1 hypothetical protein -
  G6536_RS06415 (G6536_06515) med 1275842..1276795 (+) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  G6536_RS06420 (G6536_06520) comZ 1276821..1276991 (+) 171 WP_031314537.1 ComZ family protein Regulator
  G6536_RS06425 (G6536_06525) - 1277043..1277282 (-) 240 WP_009328847.1 hypothetical protein -
  G6536_RS06430 (G6536_06530) - 1277452..1278390 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  G6536_RS06435 (G6536_06535) fabF 1278412..1279650 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  G6536_RS06440 (G6536_06540) - 1279738..1280526 (+) 789 WP_080618609.1 DUF2268 domain-containing protein -
  G6536_RS06445 (G6536_06545) - 1280718..1281692 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35401.24 Da        Isoelectric Point: 4.7908

>NTDB_id=426080 G6536_RS06415 WP_009328848.1 1275842..1276795(+) (med) [Bacillus licheniformis strain CP6]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKAEHQNVISISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFAEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQEGVIEMGKFSPVVDPSFQEEMKRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=426080 G6536_RS06415 WP_009328848.1 1275842..1276795(+) (med) [Bacillus licheniformis strain CP6]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAGTGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGACGCGGCTATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAATCTGATCTATGGGCACGGAAGCGAATACGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCCGATATTCATTTTGTTTTAATGAACTCTAAAGCCGAACACCAAAATGTGATAAGCATATCGCTTGAGGGAGAAGCGA
TGGGGTTTTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTGGAAGGGTTTGCCGAAGGGGCAAAATACCTCGATCCGGACATTGAGGTAATGACAGAATACGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCGATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGGTCCTTTGACATTCAAGAAGGCGTCATCGAGATGGGGAAATTCAGCCCTGTTGTCGATC
CGTCATTTCAAGAAGAGATGAAACGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A415IZV0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

67.197

99.054

0.666