Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GYO_RS26975 Genome accession   NC_016047
Coordinates   1037127..1037918 (+) Length   263 a.a.
NCBI ID   WP_014113104.1    Uniprot ID   G4NRG5
Organism   Bacillus spizizenii TU-B-10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032127..1042918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GYO_RS26945 (GYO_1114) - 1032967..1033998 (+) 1032 WP_014113099.1 iron chelate uptake ABC transporter family permease subunit -
  GYO_RS26950 (GYO_1116) - 1034111..1034992 (+) 882 WP_014113100.1 PhzF family phenazine biosynthesis isomerase -
  GYO_RS26955 (GYO_1117) - 1035079..1035663 (+) 585 WP_014113101.1 nitroreductase -
  GYO_RS26960 (GYO_1118) - 1035703..1035894 (-) 192 WP_014113102.1 YfhD family protein -
  GYO_RS26965 - 1035961..1036071 (-) 111 WP_003223230.1 YfhE family protein -
  GYO_RS26970 (GYO_1119) - 1036127..1037038 (-) 912 WP_014113103.1 TIGR01777 family oxidoreductase -
  GYO_RS26975 (GYO_1120) recX 1037127..1037918 (+) 792 WP_014113104.1 recombination regulator RecX Regulator
  GYO_RS26980 (GYO_1121) - 1037928..1038242 (+) 315 WP_014113105.1 YfhH family protein -
  GYO_RS26990 (GYO_1122) - 1038385..1039578 (+) 1194 WP_014113106.1 MFS transporter -
  GYO_RS26995 (GYO_1123) - 1039611..1039763 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  GYO_RS27000 (GYO_1124) - 1039888..1040157 (+) 270 WP_014113107.1 YfhJ family protein -
  GYO_RS27005 (GYO_1125) - 1040303..1040821 (+) 519 WP_014113108.1 SH3 domain-containing protein -
  GYO_RS27010 (GYO_1126) - 1040907..1041239 (+) 333 WP_014113109.1 SdpI family protein -
  GYO_RS27015 (GYO_1127) - 1041226..1042092 (+) 867 WP_014113110.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30878.19 Da        Isoelectric Point: 6.8978

>NTDB_id=42561 GYO_RS26975 WP_014113104.1 1037127..1037918(+) (recX) [Bacillus spizizenii TU-B-10]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDYLKKKETPAPVIAEVIHKLNDYKYLNDQEFAVAYVSTHKKTNGKGPDVLFRELRAKGIGDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=42561 GYO_RS26975 WP_014113104.1 1037127..1037918(+) (recX) [Bacillus spizizenii TU-B-10]
ATGCCATTTATCACAAAAATTTCAACGCAAAAAAAGAATACGGAACGCTTCAATATCTTTCTCGATGAAAAATACGCCTT
CAGTGTAGACGCGGACGTACTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAACTTGATGACCTTGACATCATTGAGATTC
AATACGGTGATGAAGTGAAAAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTA
GAGGACTATTTAAAGAAAAAAGAAACCCCGGCCCCTGTCATAGCGGAAGTCATCCATAAGCTGAACGACTATAAATACTT
AAACGACCAGGAATTTGCCGTAGCCTATGTTAGCACCCACAAAAAAACGAATGGAAAAGGTCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATCGGCGACGATACAATTAAGGAGGCGCTGAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAGGATAAAAAACTTTCAACAAAAGAACTCAAACAGCGCGCCCAAATGCA
GCTACAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCGGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.437

100

0.954

Multiple sequence alignment