Detailed information NTG0424924

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: G5B91_RS21965
• Genome accession: NZ_CP049140
• Coordinates: 4594887..4597097 (-)
• Length: 736 a.a.
• NCBI ID: WP_037007630.1
• Uniprot ID: A0A6G6J7D6
• Organism: Pseudomonas nitroreducens strain HBP1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4589887..4602097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5B91_RS21930 (G5B91_21865)	murB	4590243..4591262 (-)	1020	WP_038803719.1	UDP-N-acetylmuramate dehydrogenase	-
G5B91_RS21935 (G5B91_21870)	-	4591259..4591723 (-)	465	WP_024766673.1	low molecular weight protein-tyrosine-phosphatase	-
G5B91_RS21940 (G5B91_21875)	kdsB	4591723..4592487 (-)	765	WP_038803718.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
G5B91_RS21945 (G5B91_21880)	-	4592492..4592677 (-)	186	WP_009621404.1	Trm112 family protein	-
G5B91_RS21950 (G5B91_21885)	lpxK	4592736..4593734 (-)	999	WP_038803717.1	tetraacyldisaccharide 4'-kinase	-
G5B91_RS21955 (G5B91_21890)	-	4593734..4594183 (-)	450	WP_024766674.1	ExbD/TolR family protein	-
G5B91_RS21960 (G5B91_21895)	exbB	4594180..4594815 (-)	636	WP_024766675.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
G5B91_RS21965 (G5B91_21900)	comA	4594887..4597097 (-)	2211	WP_037007630.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
G5B91_RS21970 (G5B91_21905)	-	4597260..4597790 (+)	531	WP_024766677.1	DUF2062 domain-containing protein	-
G5B91_RS21975 (G5B91_21910)	-	4597938..4599185 (-)	1248	WP_024766678.1	lipoprotein-releasing ABC transporter permease subunit	-
G5B91_RS21980 (G5B91_21915)	lolD	4599197..4599886 (-)	690	WP_024766679.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
G5B91_RS21985 (G5B91_21920)	-	4599879..4601132 (-)	1254	WP_024766680.1	lipoprotein-releasing ABC transporter permease subunit	-
G5B91_RS21990 (G5B91_21925)	-	4601257..4601832 (+)	576	WP_024766681.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79545.02 Da
• Isoelectric Point: 8.5000

>NTDB_id=424924 G5B91_RS21965 WP_037007630.1 4594887..4597097(-) (comA) [Pseudomonas nitroreducens strain HBP1]
MFALALGLLALRWLPALPSGWVLLLLALCALPLLFTRGYFVGLFLLGFAWACQSAQWALDDRLAPELDGRTLWLEGRVEG
LPDRSGPSVRFVLSEVSSPRAQVPATLRLSWFGGPPVEGGERWRLAVKLKRPHGMVNGVGFDYEAWLTAQRIGATGSVKD
GQRLEASSGPRAWREAWRQRLLAVDAQGRSGALAALVLGDASGLTTADWQVLQDTGTLHLMVISGSHISLLAGLLYAVVA
GLARLGCWPSRLPWLPCACLLAASGAWAYSLMAGFEVPLQRACVMVSIVLLWRLRYRHRGLWTPLLGALLAVLVAEPLVV
LLPGFWLSYAAVALLIFGFSGRLGRWTAWRTWLRAQWLMAIGLLPASIALGLPLSISGVAANLIAVPWVELVVVPLALLG
SLALGVPGVGELLLWVSGGLLEILFRLLGWMAELAPAWQPVAAPTWTLILAMLGALLLLAPAGVPLRSLGLAMFLPVFWP
SIPLPASGMAEIRVLDVGQGLSVLIRTRSQSWLYDTGARNGDFDIGERVVVPTLRSLGIGKLDLLMLSHADNDHAGGALA
VKHSLRPAQVISGEPERLAPELQASPCRIEEWRVDDVRLSSWTWAGARESNDRSCALEVEANGERILLTGDLPQSAELAW
LAAHPAERIDWLLAGHHGSRSSSGLVFLRAIKPSSALISRGANNPYGHPHPSVVERFRTLGIRIQDTAEQGALTLMLGAH
GELRGVREGAHFWQEN

Nucleotide

• Length: 2211 bp

>NTDB_id=424924 G5B91_RS21965 WP_037007630.1 4594887..4597097(-) (comA) [Pseudomonas nitroreducens strain HBP1]
ATGTTCGCTCTGGCCCTGGGACTGCTGGCGCTGCGCTGGCTGCCGGCGCTGCCATCTGGTTGGGTGCTGCTGCTTCTCGC
ACTGTGCGCTTTGCCTCTGTTGTTCACTCGCGGCTACTTCGTCGGGCTGTTCCTGCTCGGCTTCGCCTGGGCCTGCCAAT
CGGCCCAGTGGGCGCTGGATGACCGGCTGGCGCCGGAGCTGGACGGCCGCACGCTGTGGCTGGAGGGCAGGGTAGAGGGC
TTGCCGGATCGTTCGGGGCCTTCAGTGCGCTTCGTGCTCTCCGAGGTTTCCAGCCCGCGCGCGCAGGTTCCGGCAACACT
GCGCCTGTCCTGGTTCGGCGGGCCGCCGGTAGAAGGTGGCGAGCGCTGGCGGTTGGCAGTGAAGCTCAAGCGTCCCCACG
GCATGGTCAACGGCGTGGGCTTCGATTACGAGGCCTGGCTCACTGCCCAGCGCATCGGCGCCACCGGCAGCGTGAAGGAC
GGGCAGCGCCTGGAGGCTTCCAGCGGCCCGCGCGCCTGGCGCGAAGCCTGGAGGCAACGCCTGCTGGCAGTGGACGCCCA
GGGGCGCTCTGGTGCGCTTGCCGCGCTGGTACTGGGCGACGCTTCCGGGTTGACCACGGCGGACTGGCAGGTCCTGCAGG
ACACCGGAACCCTGCACCTGATGGTGATTTCCGGCTCACACATTTCCCTGCTGGCGGGTCTGCTCTACGCCGTCGTGGCG
GGACTGGCGCGCCTGGGCTGCTGGCCATCCCGTCTGCCCTGGTTGCCCTGCGCCTGCCTGCTGGCTGCCAGCGGCGCCTG
GGCCTACAGCCTGATGGCGGGCTTCGAGGTGCCGTTGCAGCGCGCGTGCGTGATGGTCTCCATCGTCCTGCTGTGGCGTT
TGCGCTATCGCCATCGGGGATTGTGGACGCCGCTGCTGGGCGCTTTGCTAGCCGTGCTGGTGGCTGAGCCCTTGGTGGTG
TTGCTGCCGGGGTTCTGGTTGTCCTACGCGGCGGTGGCTTTGCTGATCTTCGGCTTCTCCGGCCGCCTGGGGCGCTGGAC
GGCCTGGCGCACCTGGCTGCGTGCGCAGTGGCTGATGGCGATCGGGTTGTTGCCGGCGTCCATCGCGCTGGGCCTGCCGC
TGAGCATTTCCGGTGTCGCCGCCAACCTGATTGCGGTGCCCTGGGTGGAGCTGGTCGTGGTTCCGCTCGCTCTGTTGGGC
AGTCTGGCGCTGGGGGTTCCCGGCGTGGGGGAGTTGCTGCTCTGGGTGTCCGGCGGCCTGCTGGAAATACTGTTTCGTCT
GCTCGGATGGATGGCCGAGCTGGCGCCCGCCTGGCAGCCGGTGGCGGCGCCAACCTGGACGCTGATACTGGCGATGCTCG
GTGCGCTCCTGCTGCTGGCGCCGGCGGGAGTACCGCTGCGCTCGCTCGGGCTGGCGATGTTCCTGCCGGTGTTCTGGCCG
AGCATTCCGCTGCCCGCGTCGGGCATGGCCGAGATCCGCGTACTGGACGTGGGGCAGGGGCTTTCGGTACTGATCCGTAC
CCGCAGTCAGAGCTGGCTCTACGACACTGGTGCGCGCAACGGCGATTTCGATATCGGCGAGCGCGTGGTCGTGCCGACCT
TGCGCAGCCTCGGCATCGGCAAGCTCGATCTGCTGATGCTCAGCCATGCGGACAATGACCATGCCGGCGGTGCGTTGGCG
GTGAAGCATTCACTCCGGCCTGCGCAGGTTATCAGTGGCGAGCCGGAAAGACTGGCGCCAGAGTTGCAGGCAAGCCCCTG
TCGAATCGAGGAATGGAGGGTTGATGACGTACGCCTGTCCAGCTGGACGTGGGCAGGCGCCAGGGAAAGCAACGACCGCT
CGTGCGCGCTGGAAGTCGAGGCCAATGGCGAGCGCATCCTGCTCACTGGCGACCTGCCACAATCTGCCGAACTGGCCTGG
CTGGCGGCACATCCGGCCGAGCGCATCGATTGGTTGCTGGCCGGGCACCACGGCAGCCGTAGTTCCTCCGGGCTGGTCTT
CCTTCGTGCGATCAAGCCTTCCTCTGCGTTGATCTCCCGCGGCGCCAACAACCCCTACGGGCACCCGCATCCGTCGGTCG
TCGAGCGCTTCCGCACGCTGGGCATCCGGATTCAGGATACGGCGGAGCAGGGCGCACTGACTCTGATGCTTGGTGCCCAT
GGCGAGCTCCGGGGAGTGCGGGAAGGCGCACATTTCTGGCAGGAAAATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-673)

• Competence protein (Competence) (196-459)

• Domain of unknown function (DUF4131) (DUF4131) (16-163)

3D structure

• AlphaFold DB: A0A6G6J7D6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.078	97.554	0.567