Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BCOA_RS31715 | Genome accession | NC_016023 |
| Coordinates | 3040233..3041357 (+) | Length | 374 a.a. |
| NCBI ID | WP_014098021.1 | Uniprot ID | - |
| Organism | Heyndrickxia coagulans 36D1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3035233..3046357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCOA_RS31685 (Bcoa_2808) | - | 3036523..3036744 (+) | 222 | WP_013859652.1 | YqgQ family protein | - |
| BCOA_RS31690 (Bcoa_2809) | - | 3036737..3037705 (+) | 969 | WP_014098016.1 | ROK family glucokinase | - |
| BCOA_RS34855 (Bcoa_2810) | - | 3038010..3038183 (-) | 174 | WP_014098017.1 | DUF2759 domain-containing protein | - |
| BCOA_RS31700 (Bcoa_2811) | - | 3038313..3038942 (+) | 630 | WP_014098018.1 | MBL fold metallo-hydrolase | - |
| BCOA_RS31705 (Bcoa_2812) | - | 3039011..3039253 (-) | 243 | WP_014098019.1 | DUF2626 domain-containing protein | - |
| BCOA_RS31710 (Bcoa_2813) | - | 3039331..3040038 (-) | 708 | WP_014098020.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BCOA_RS31715 (Bcoa_2814) | comGA | 3040233..3041357 (+) | 1125 | WP_014098021.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BCOA_RS31720 (Bcoa_2815) | comGB | 3041359..3042321 (+) | 963 | WP_014098022.1 | competence type IV pilus assembly protein ComGB | - |
| BCOA_RS31725 (Bcoa_2816) | comGC | 3042390..3042701 (+) | 312 | WP_014098023.1 | competence type IV pilus major pilin ComGC | - |
| BCOA_RS31730 (Bcoa_2817) | comGD | 3042698..3043141 (+) | 444 | WP_014098024.1 | competence type IV pilus minor pilin ComGD | - |
| BCOA_RS31735 (Bcoa_2818) | - | 3043128..3043436 (+) | 309 | WP_014098025.1 | type II secretion system protein | - |
| BCOA_RS31740 (Bcoa_2819) | comGF | 3043399..3043884 (+) | 486 | WP_014098026.1 | competence type IV pilus minor pilin ComGF | - |
| BCOA_RS31745 (Bcoa_2820) | comGG | 3043881..3044249 (+) | 369 | WP_014098027.1 | competence type IV pilus minor pilin ComGG | - |
| BCOA_RS31750 (Bcoa_2821) | - | 3044246..3044803 (+) | 558 | WP_014098028.1 | shikimate kinase | - |
| BCOA_RS34860 (Bcoa_2822) | - | 3044790..3044966 (+) | 177 | WP_014098029.1 | YqzE family protein | - |
| BCOA_RS31755 (Bcoa_2823) | - | 3044999..3045790 (-) | 792 | WP_014098030.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 42374.92 Da Isoelectric Point: 9.5494
>NTDB_id=42492 BCOA_RS31715 WP_014098021.1 3040233..3041357(+) (comGA) [Heyndrickxia coagulans 36D1]
MSVEKIAELLIGQAVKNNVTDVHIVPKEKHYHVQFRQYGRLYPHRNLSAKAGERLISHLKFMSSMDISEKRKPQSGSFAM
NVLQQTISLRISTLPTSLSKESLVIRILPHEEKFQLSQISLFPSSTKKLMALLNHSHGMLIFSGPTGSGKSTTMYTLVEH
CAKRFLRNVITLEDPVEKQSDSFLQVQVNEKAGITYSTGLKAILRHDPDIILVGEIRDAETARIAIRASLTGHLVLTTLH
TRDAKGAIYRLMEFGVSIHEMEQTLLAVSAQRLITLRCPVCGGIRCPHDSQDCPRSREKRQTAVYELLYGKNLQRVLKEA
KGEQVYYHYPTLKEWLRKGIVLGYISEEEYHRWIAEEEEADKPQTAGALSYPGR
MSVEKIAELLIGQAVKNNVTDVHIVPKEKHYHVQFRQYGRLYPHRNLSAKAGERLISHLKFMSSMDISEKRKPQSGSFAM
NVLQQTISLRISTLPTSLSKESLVIRILPHEEKFQLSQISLFPSSTKKLMALLNHSHGMLIFSGPTGSGKSTTMYTLVEH
CAKRFLRNVITLEDPVEKQSDSFLQVQVNEKAGITYSTGLKAILRHDPDIILVGEIRDAETARIAIRASLTGHLVLTTLH
TRDAKGAIYRLMEFGVSIHEMEQTLLAVSAQRLITLRCPVCGGIRCPHDSQDCPRSREKRQTAVYELLYGKNLQRVLKEA
KGEQVYYHYPTLKEWLRKGIVLGYISEEEYHRWIAEEEEADKPQTAGALSYPGR
Nucleotide
Download Length: 1125 bp
>NTDB_id=42492 BCOA_RS31715 WP_014098021.1 3040233..3041357(+) (comGA) [Heyndrickxia coagulans 36D1]
ATGTCAGTTGAAAAAATTGCGGAACTTTTGATCGGACAGGCGGTAAAAAACAATGTGACCGATGTCCATATCGTTCCGAA
AGAAAAGCATTACCATGTCCAGTTCCGGCAGTACGGAAGGCTGTACCCCCACCGCAACCTTTCCGCGAAAGCCGGGGAAA
GGCTGATATCCCATTTGAAATTTATGTCTTCCATGGATATCAGTGAAAAACGGAAACCCCAAAGCGGGTCGTTCGCCATG
AATGTTTTGCAGCAGACGATCTCCTTAAGAATTTCGACGCTGCCAACCTCTCTTTCCAAAGAGAGCCTCGTTATTCGGAT
CTTGCCCCATGAAGAAAAATTCCAGCTCAGCCAAATTTCACTTTTTCCATCGAGCACAAAAAAATTAATGGCGCTGCTCA
ACCATTCGCATGGGATGCTGATTTTCAGCGGCCCGACTGGAAGCGGCAAGTCTACGACGATGTATACGCTTGTTGAGCAC
TGCGCAAAACGGTTTTTACGGAATGTGATTACACTGGAAGACCCTGTTGAAAAACAAAGCGACTCGTTTTTGCAGGTACA
GGTGAATGAAAAAGCAGGTATTACTTACAGCACAGGGCTGAAAGCGATTTTGCGCCATGATCCGGATATTATCCTGGTGG
GGGAAATCCGTGATGCCGAAACAGCAAGAATTGCGATCCGCGCATCACTCACCGGCCATCTCGTGCTGACGACATTGCAT
ACGCGTGACGCAAAGGGCGCGATTTACAGGCTGATGGAATTTGGGGTGAGCATCCACGAAATGGAGCAGACTTTGCTCGC
AGTCAGCGCACAGCGGCTGATTACATTGCGATGCCCGGTATGCGGTGGGATCCGCTGTCCGCATGATTCGCAAGATTGCC
CACGCAGCCGAGAAAAGCGGCAAACCGCGGTATATGAGCTGCTGTACGGGAAAAATTTGCAGCGAGTGCTGAAAGAAGCA
AAGGGGGAACAGGTCTACTATCATTATCCGACACTGAAAGAATGGCTCAGAAAGGGGATTGTGCTTGGATACATTTCTGA
AGAAGAGTATCACCGCTGGATTGCCGAAGAGGAAGAAGCGGATAAGCCTCAAACTGCAGGGGCGCTTTCTTACCCGGGTC
GGTGA
ATGTCAGTTGAAAAAATTGCGGAACTTTTGATCGGACAGGCGGTAAAAAACAATGTGACCGATGTCCATATCGTTCCGAA
AGAAAAGCATTACCATGTCCAGTTCCGGCAGTACGGAAGGCTGTACCCCCACCGCAACCTTTCCGCGAAAGCCGGGGAAA
GGCTGATATCCCATTTGAAATTTATGTCTTCCATGGATATCAGTGAAAAACGGAAACCCCAAAGCGGGTCGTTCGCCATG
AATGTTTTGCAGCAGACGATCTCCTTAAGAATTTCGACGCTGCCAACCTCTCTTTCCAAAGAGAGCCTCGTTATTCGGAT
CTTGCCCCATGAAGAAAAATTCCAGCTCAGCCAAATTTCACTTTTTCCATCGAGCACAAAAAAATTAATGGCGCTGCTCA
ACCATTCGCATGGGATGCTGATTTTCAGCGGCCCGACTGGAAGCGGCAAGTCTACGACGATGTATACGCTTGTTGAGCAC
TGCGCAAAACGGTTTTTACGGAATGTGATTACACTGGAAGACCCTGTTGAAAAACAAAGCGACTCGTTTTTGCAGGTACA
GGTGAATGAAAAAGCAGGTATTACTTACAGCACAGGGCTGAAAGCGATTTTGCGCCATGATCCGGATATTATCCTGGTGG
GGGAAATCCGTGATGCCGAAACAGCAAGAATTGCGATCCGCGCATCACTCACCGGCCATCTCGTGCTGACGACATTGCAT
ACGCGTGACGCAAAGGGCGCGATTTACAGGCTGATGGAATTTGGGGTGAGCATCCACGAAATGGAGCAGACTTTGCTCGC
AGTCAGCGCACAGCGGCTGATTACATTGCGATGCCCGGTATGCGGTGGGATCCGCTGTCCGCATGATTCGCAAGATTGCC
CACGCAGCCGAGAAAAGCGGCAAACCGCGGTATATGAGCTGCTGTACGGGAAAAATTTGCAGCGAGTGCTGAAAGAAGCA
AAGGGGGAACAGGTCTACTATCATTATCCGACACTGAAAGAATGGCTCAGAAAGGGGATTGTGCTTGGATACATTTCTGA
AGAAGAGTATCACCGCTGGATTGCCGAAGAGGAAGAAGCGGATAAGCCTCAAACTGCAGGGGCGCTTTCTTACCCGGGTC
GGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
54.469 |
95.722 |
0.521 |