Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G5B91_RS02420 Genome accession   NZ_CP049140
Coordinates   489114..489521 (+) Length   135 a.a.
NCBI ID   WP_015475142.1    Uniprot ID   A0AA42HJ21
Organism   Pseudomonas nitroreducens strain HBP1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 484114..494521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G5B91_RS02390 (G5B91_02390) - 484159..485163 (-) 1005 WP_037013504.1 aspartate carbamoyltransferase catalytic subunit -
  G5B91_RS02395 (G5B91_02395) pyrR 485209..485721 (-) 513 WP_024766241.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  G5B91_RS02400 (G5B91_02400) ruvX 485840..486277 (-) 438 WP_089285805.1 Holliday junction resolvase RuvX -
  G5B91_RS02405 (G5B91_02405) - 486274..486843 (-) 570 WP_024766240.1 YqgE/AlgH family protein -
  G5B91_RS02410 (G5B91_02410) - 486919..487812 (-) 894 WP_024766239.1 energy transducer TonB -
  G5B91_RS02415 (G5B91_02415) gshB 487869..488831 (-) 963 WP_024766238.1 glutathione synthase -
  G5B91_RS02420 (G5B91_02420) pilG 489114..489521 (+) 408 WP_015475142.1 twitching motility response regulator PilG Regulator
  G5B91_RS02425 (G5B91_02425) pilH 489568..489933 (+) 366 WP_024766237.1 twitching motility response regulator PilH -
  G5B91_RS02430 (G5B91_02430) - 489988..490524 (+) 537 WP_017520132.1 chemotaxis protein CheW -
  G5B91_RS02435 (G5B91_02435) - 490608..492656 (+) 2049 WP_024766236.1 methyl-accepting chemotaxis protein -
  G5B91_RS02440 (G5B91_02440) - 492719..493582 (+) 864 WP_024766235.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14810.17 Da        Isoelectric Point: 6.8621

>NTDB_id=424905 G5B91_RS02420 WP_015475142.1 489114..489521(+) (pilG) [Pseudomonas nitroreducens strain HBP1]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEHAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=424905 G5B91_RS02420 WP_015475142.1 489114..489521(+) (pilG) [Pseudomonas nitroreducens strain HBP1]
ATGGAACAGCATTCCGACGGTTTGAAAGTAATGGTGATCGACGATTCCAAGACGATTCGTCGCACGGCTGAAACCCTGCT
GAAGAAGGTTGGCTGCGATGTCATTACAGCCATCGACGGCTTCGACGCGCTGGCCAAGATCGCCGATACCCATCCCAGCA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAATAGTGCCTTCAAA
TCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGTTCCGATCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAACTGCTCGGCGCGATCAAGACCCATGTGCCCGACTTCACCCCGGTGGAGCACG
CTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393