Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ST64987_RS07635 Genome accession   NZ_CP049053
Coordinates   1452840..1453571 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain ST64987     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447840..1458571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST64987_RS07610 (ST64987_1447) - 1448889..1450070 (+) 1182 WP_167401587.1 NAD(P)/FAD-dependent oxidoreductase -
  ST64987_RS07620 (ST64987_1448) trmB 1450306..1450947 (-) 642 WP_167401588.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ST64987_RS07625 (ST64987_1449) ccrZ 1450957..1451748 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  ST64987_RS07630 (ST64987_1450) pptB 1451806..1452840 (-) 1035 WP_375709249.1 ABC transporter permease Regulator
  ST64987_RS07635 (ST64987_1451) pptA 1452840..1453571 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  ST64987_RS07640 (ST64987_1452) - 1453636..1454055 (+) 420 WP_011227486.1 HIT family protein -
  ST64987_RS07645 (ST64987_1453) - 1454052..1454351 (+) 300 WP_101415677.1 hypothetical protein -
  ST64987_RS07650 (ST64987_1454) - 1454403..1455131 (-) 729 WP_023909893.1 hypothetical protein -
  ST64987_RS07655 (ST64987_1455) - 1455149..1455784 (-) 636 WP_023909894.1 DUF4230 domain-containing protein -
  ST64987_RS10500 - 1455803..1455928 (-) 126 WP_259699999.1 hypothetical protein -
  ST64987_RS07660 (ST64987_1456) - 1456340..1458445 (-) 2106 WP_167401589.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=424492 ST64987_RS07635 WP_002951673.1 1452840..1453571(-) (pptA) [Streptococcus thermophilus strain ST64987]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=424492 ST64987_RS07635 WP_002951673.1 1452840..1453571(-) (pptA) [Streptococcus thermophilus strain ST64987]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTATGCCAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGCGCCTTTATTGTCAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971