Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   G4O42_RS15075 Genome accession   NZ_CP048876
Coordinates   3049359..3049499 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus sp. LUNF1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3044359..3054499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4O42_RS15050 (G4O42_14945) - 3044705..3045088 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  G4O42_RS15055 (G4O42_14950) comA 3045110..3045754 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  G4O42_RS15060 (G4O42_14955) comP 3045835..3048135 (-) 2301 WP_032876801.1 histidine kinase Regulator
  G4O42_RS15065 (G4O42_14960) comX 3048149..3048322 (-) 174 WP_012118314.1 competence pheromone ComX -
  G4O42_RS15070 (G4O42_14965) - 3048291..3049151 (-) 861 WP_142925231.1 polyprenyl synthetase family protein -
  G4O42_RS15075 (G4O42_14970) degQ 3049359..3049499 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  G4O42_RS15085 (G4O42_14980) - 3049965..3050306 (+) 342 WP_032876795.1 hypothetical protein -
  G4O42_RS15090 (G4O42_14985) - 3050313..3051536 (-) 1224 WP_032876792.1 EAL and HDOD domain-containing protein -
  G4O42_RS15095 (G4O42_14990) - 3051666..3053132 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  G4O42_RS15100 (G4O42_14995) - 3053150..3053701 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  G4O42_RS15105 (G4O42_15000) - 3053798..3054196 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=423674 G4O42_RS15075 WP_003152043.1 3049359..3049499(-) (degQ) [Bacillus sp. LUNF1]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=423674 G4O42_RS15075 WP_003152043.1 3049359..3049499(-) (degQ) [Bacillus sp. LUNF1]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891