Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   G4P54_RS12740 Genome accession   NZ_CP048852
Coordinates   2393517..2395247 (-) Length   576 a.a.
NCBI ID   WP_167872851.1    Uniprot ID   A0A6H0WKD4
Organism   Bacillus tequilensis strain EA-CB0015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2388517..2400247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS12715 (G4P54_12670) - 2389120..2389254 (+) 135 WP_003236876.1 hypothetical protein -
  G4P54_RS12720 (G4P54_12675) - 2389326..2390444 (+) 1119 WP_167872849.1 NADH-dependent flavin oxidoreductase -
  G4P54_RS12725 (G4P54_12680) - 2390659..2390838 (-) 180 WP_024715107.1 hypothetical protein -
  G4P54_RS12730 (G4P54_12685) spo0A 2390984..2391787 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  G4P54_RS12735 (G4P54_12690) spoIVB 2392064..2393344 (-) 1281 WP_167872850.1 SpoIVB peptidase -
  G4P54_RS12740 (G4P54_12695) recN 2393517..2395247 (-) 1731 WP_167872851.1 DNA repair protein RecN Machinery gene
  G4P54_RS12745 (G4P54_12700) argR 2395283..2395732 (-) 450 WP_014114358.1 arginine repressor ArgR -
  G4P54_RS12750 (G4P54_12705) - 2395829..2396674 (-) 846 WP_024715104.1 TlyA family RNA methyltransferase -
  G4P54_RS12755 (G4P54_12710) dxs 2396671..2398572 (-) 1902 WP_167872852.1 1-deoxy-D-xylulose-5-phosphate synthase -
  G4P54_RS12760 (G4P54_12715) - 2398751..2399641 (-) 891 WP_167872853.1 polyprenyl synthetase family protein -
  G4P54_RS12765 (G4P54_12720) - 2399631..2399885 (-) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64518.28 Da        Isoelectric Point: 4.7340

>NTDB_id=423564 G4P54_RS12740 WP_167872851.1 2393517..2395247(-) (recN) [Bacillus tequilensis strain EA-CB0015]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVFGVC
AEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGIEVESALQ
AYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKLSESVSNSYYLLEDATFQMRNMLDELEYDPDRLNYIEARLNEMKQLKRKYGATV
EDILEYASKIEEEIDQIENRDSHLQTLKKELDSVGKDVAVEAANVSQIRKAWAKKLADEIHRELKSLYMEKTTFDTEFKV
RTASHNEEAPVVNGQPVQLSEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSHQEKVAEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=423564 G4P54_RS12740 WP_167872851.1 2393517..2395247(-) (recN) [Bacillus tequilensis strain EA-CB0015]
TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGAGGGCTTACGGTATT
AACAGGAGAAACCGGAGCCGGCAAATCCATTATCATAGACGCCATTTCTCTTTTAGTCGGCGGCCGCGGATCGTCTGAAT
TTGTCAGATATGGAGAGGCGAAAGCCGAGCTTGAAGGGCTGTTTCTATTGGAGAGCGGCCATCCTGTTTTTGGTGTATGC
GCTGAGCAGGGAATCGACGTTTCAGACGAAATGATTGTCATGAGAAGGGATATCAGCACGAGCGGAAAAAGTGTTTGCCG
TGTGAATGGCAAGCTTGTCACGATTGCCTCGCTAAGAGAGATCGGAAGGCTTTTATTAGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAGGACGAAAATCATCTCCAGCTTTTGGACAAGTTTGCCGGAATCGAAGTGGAAAGCGCACTCCAA
GCGTATCAGGAAGGGTACCAGCGGTATATGAAGCTCCTTAAAAAGCTAAAGCAGCTTTCTGAAAGCGAACAGGAAATGGC
CCATCGTCTGGATCTGATTCAATTTCAGCTGGAAGAAATTGAATCGGCAAAGCTTGAGCTTAATGAAGATGAACAGCTCC
AAGAAGAACGCCAGCAAATTTCAAACTTTGAGAAGATCTATGAATCGCTGCAAAATGCATATAACGCGCTGCGCAGTGAG
CAGGGCGGACTGGACTGGGTCGGAATGGCATCAGCGCAGCTTGAAGATATATCTGATATTAATGAACCGCTTAAAAAACT
GTCCGAAAGTGTTTCGAATTCTTACTATCTTCTGGAAGACGCTACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
ATGATCCGGATCGGCTGAACTATATTGAAGCTCGTCTCAATGAGATGAAACAGCTGAAGCGAAAATACGGTGCTACTGTT
GAGGACATTTTAGAATATGCTTCTAAGATTGAAGAAGAGATTGACCAAATAGAAAACAGGGACAGCCATCTTCAAACTTT
GAAGAAGGAGCTTGACTCAGTCGGCAAAGATGTTGCAGTGGAAGCGGCAAATGTTTCGCAAATTCGGAAAGCATGGGCAA
AAAAACTGGCTGATGAAATTCATCGGGAATTAAAAAGCCTGTATATGGAAAAAACAACGTTTGATACGGAGTTTAAGGTC
AGAACAGCGTCTCACAATGAGGAGGCGCCGGTTGTAAACGGCCAGCCTGTTCAGCTGTCTGAACAAGGGATTGATTTGGT
GAAGTTTTTAATTTCAACCAATACAGGCGAACCATTGAAATCTCTTTCGAAAGTTGCTTCCGGAGGAGAGCTGTCACGGG
TCATGCTTGCCATAAAAAGCATTTTTTCTTCTCAGCAGGACGTGACATCGATTATTTTTGATGAAGTCGATACCGGTGTA
AGCGGCAGAGTCGCACAGGCAATCGCTGAGAAGATCCACAAAGTGTCAATAGGATCACAAGTGCTGTGTATTACACATTT
GCCTCAGGTAGCGGCCATGGCAGATACGCATCTTTATATCGCGAAGGAATTAAAAGACGGCAGAACGACGACCCGTGTCA
AGCCGCTTTCTCACCAGGAAAAGGTGGCGGAAATCGGGCGCATGATTGCCGGAGTCGAAGTGACAGACTTAACAAAACGC
CATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACAGGGTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WKD4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

97.049

100

0.97