Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   G4P54_RS12730 Genome accession   NZ_CP048852
Coordinates   2390984..2391787 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus tequilensis strain EA-CB0015     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2385984..2396787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS12700 (G4P54_12655) - 2387048..2387779 (-) 732 WP_167872848.1 glycerophosphodiester phosphodiesterase -
  G4P54_RS12705 (G4P54_12660) - 2387861..2388478 (-) 618 WP_024715110.1 N-acetylmuramoyl-L-alanine amidase family protein -
  G4P54_RS12710 (G4P54_12665) - 2388498..2388794 (-) 297 WP_167873876.1 lipoprotein -
  G4P54_RS12715 (G4P54_12670) - 2389120..2389254 (+) 135 WP_003236876.1 hypothetical protein -
  G4P54_RS12720 (G4P54_12675) - 2389326..2390444 (+) 1119 WP_167872849.1 NADH-dependent flavin oxidoreductase -
  G4P54_RS12725 (G4P54_12680) - 2390659..2390838 (-) 180 WP_024715107.1 hypothetical protein -
  G4P54_RS12730 (G4P54_12685) spo0A 2390984..2391787 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  G4P54_RS12735 (G4P54_12690) spoIVB 2392064..2393344 (-) 1281 WP_167872850.1 SpoIVB peptidase -
  G4P54_RS12740 (G4P54_12695) recN 2393517..2395247 (-) 1731 WP_167872851.1 DNA repair protein RecN Machinery gene
  G4P54_RS12745 (G4P54_12700) argR 2395283..2395732 (-) 450 WP_014114358.1 arginine repressor ArgR -
  G4P54_RS12750 (G4P54_12705) - 2395829..2396674 (-) 846 WP_024715104.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=423563 G4P54_RS12730 WP_003226427.1 2390984..2391787(-) (spo0A) [Bacillus tequilensis strain EA-CB0015]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=423563 G4P54_RS12730 WP_003226427.1 2390984..2391787(-) (spo0A) [Bacillus tequilensis strain EA-CB0015]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGTGTTGCCTATAACGGACAGGAGTGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTAAGGGAATCAGATCTTAAGAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGTGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGACATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCCCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGATGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCACATATTAAAGGTTATCTCTATTTACGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCAGACATTGCCAAAAAATTCAACACAACTGCAAGCCGTGTTGAAA
GAGCAATCCGCCATGCGATTGAAGTGGCATGGAGCAGAGGAAACATTGACTCCATCTCCTCGTTGTTCGGGTATACCGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTTATTGCGATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1