Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   G4P54_RS05650 Genome accession   NZ_CP048852
Coordinates   1072489..1076193 (+) Length   1234 a.a.
NCBI ID   WP_167872047.1    Uniprot ID   A0A6H0WGJ4
Organism   Bacillus tequilensis strain EA-CB0015     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1067489..1081193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS05635 (G4P54_05620) - 1067931..1068260 (-) 330 WP_167872044.1 four-helix bundle copper-binding protein -
  G4P54_RS05640 (G4P54_05625) - 1068379..1068816 (-) 438 WP_167872045.1 ferritin family protein -
  G4P54_RS05645 (G4P54_05630) addB 1069002..1072502 (+) 3501 WP_167872046.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  G4P54_RS05650 (G4P54_05635) addA 1072489..1076193 (+) 3705 WP_167872047.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  G4P54_RS05655 (G4P54_05640) sbcD 1076266..1077441 (+) 1176 WP_167872048.1 exonuclease subunit SbcD -
  G4P54_RS05660 (G4P54_05645) sbcC 1077438..1080833 (+) 3396 WP_167872049.1 exonuclease subunit SbcC -
  G4P54_RS05665 (G4P54_05650) - 1080848..1081150 (+) 303 WP_167872050.1 HNH endonuclease -

Sequence


Protein


Download         Length: 1234 a.a.        Molecular weight: 141106.47 Da        Isoelectric Point: 5.1439

>NTDB_id=423545 G4P54_RS05650 WP_167872047.1 1072489..1076193(+) (addA) [Bacillus tequilensis strain EA-CB0015]
MNIPKPADSTWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRLLVVTFTNASAAEMKHRIADA
LEKELVKRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKYYYLIDIDPGFRIADQTEGELLGDEVLDELFEDEYAKGDEA
FFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELSFYQYVKEDIAMVLNGAREKLLRA
LELTKAPGGPAPRADNFLDDLAQIDELIQHQDDFNELYKRVPAVSFKRAKAVKGDEFDPALLDEATDLRNGAKKLLEKLK
TDYFTRSPEQHLKSLAEMKPVIDTLVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDKGERGPSEAARFYQEQ
FHEVLVDEYQDTNLVQESILQLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGIGTGRKIDLNKNFRS
RADILDSTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNGETETELLLIDNAEETDAGEEAEELETVQFEAKAIAKEIR
KLISSPFKVYDGKTKTHRNIQYRDIVILLRSMPWAPQIMEELRAQGIPVYANLTSGYFEAVEVAVAISVLKVIDNPYQDI
PLASVLRSPIVGADENELSLIRLENTKAPYYEAMKDYLAAGDRNGELYQKLQTFYGHLQKWRAFSKNHSVSELIWEVYRD
TKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLE
FPVVFAAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFL
LGSCKDHQKQLAKWQASASQTDWLLPEFDRYQAKTYLDFIGPALARHRDMETLAENGATARPDISGHPARFAVRMIHSYD
LLDDDLEERMEEKSERLESIRQGEPVPGSFAFDEKAREQLNWTYPYHEVTQISTKQSVSEIKRKREYEDEYSGRAPVKPA
DGSMLYRRPAFMMKKGLTAAEKGTAMHTVMQHISLTHVPTIEEAEQTVHKLYEKELLTEEQKTAIDIEEIVQFFHTEIGG
QLISAQWKNREVPFSLALPAKEIYPDAQEADEPLLVQGIIDCLYETDGGLYLLDYKSDRIKGKFQHGFEGAVPILKKRYE
TQIQLYTKAVEQIAKTKVKGCALYFFDGGHILTL

Nucleotide


Download         Length: 3705 bp        

>NTDB_id=423545 G4P54_RS05650 WP_167872047.1 1072489..1076193(+) (addA) [Bacillus tequilensis strain EA-CB0015]
ATGAACATTCCTAAACCGGCAGACAGCACGTGGACAGATGACCAATGGAATGCCATTGTTTCAACCGGCCAGGATATTCT
TGTGGCGGCTGCTGCGGGCTCCGGGAAAACCGCTGTGCTCGTTGAGCGAATGATCCGGAAAATCACAGCGGAAGAAAACC
CGATTGATGTAGACCGGCTTCTCGTTGTGACCTTTACAAACGCCTCGGCGGCAGAAATGAAACACCGAATTGCGGATGCC
TTGGAAAAAGAGCTCGTAAAGCGCCCCGGCTCGCTGCATATCAGACGCCAGCTGTCTCTTTTAAACCGGGCCAGCATTTC
GACACTTCATTCCTTTTGCCTGCAAGTGCTGAAAAAATATTACTATTTGATCGATATTGATCCGGGCTTTCGGATTGCCG
ATCAGACCGAAGGCGAGCTGCTTGGGGATGAAGTGCTGGATGAGCTGTTCGAAGACGAATACGCAAAGGGTGACGAGGCG
TTTTTTGAGCTGGTTGACCGCTACACGACAGACCGGCATGATCTGGATCTGCAATTTCTCGTCAAACAGGTGTACGAGTA
TTCCCGATCCCATCCAAACCCGGAGGCATGGCTGGAAAGCTTTGTTCATTTATATGATGTATCTGAAAAGAGCGCGATCG
AAGAGCTTTCGTTTTATCAATATGTCAAAGAGGATATTGCAATGGTGCTTAACGGAGCGAGGGAAAAGCTCCTGCGCGCC
CTTGAACTGACAAAAGCGCCGGGCGGACCGGCGCCGCGCGCTGACAATTTCCTTGATGATCTTGCGCAGATTGATGAACT
GATTCAGCATCAGGACGATTTCAATGAACTTTATAAGCGGGTGCCTGCCGTCTCATTTAAGCGCGCGAAGGCGGTAAAAG
GGGACGAGTTTGATCCCGCGCTGCTTGATGAAGCGACAGACTTGCGAAATGGTGCGAAAAAACTGCTTGAAAAGCTCAAA
ACCGACTACTTCACAAGAAGTCCTGAACAGCATTTGAAAAGCCTAGCCGAGATGAAGCCTGTCATTGATACACTCGTACA
GCTTGTCATTAGCTATGGAAAGCGATTCGAAGCCGCGAAGCAGGAAAAATCAATCATTGATTTTTCTGATTTGGAGCATT
ACTGTTTGGCGATTTTGACAGCTGAAAATGACAAAGGCGAACGCGGTCCGAGCGAGGCAGCAAGATTTTATCAGGAGCAG
TTTCATGAGGTGCTCGTTGACGAATATCAGGATACCAACCTCGTGCAGGAATCGATCCTGCAGCTTGTCACAAGCGGGCC
GGAGGAGACTGGAAACCTGTTTATGGTAGGAGATGTCAAACAGTCGATTTATCGATTCAGGCTTGCGGAGCCGCTTCTTT
TCCTCTCCAAATACAAACGGTTTACAGAGAGCGGAATAGGAACGGGACGGAAGATCGACTTGAATAAAAACTTCCGAAGC
CGGGCTGATATTTTAGACAGCACAAACTTTTTATTTAAACAGCTGATGGGCGGCAAAATCGGTGAGGTGGATTATGACGA
GCAGGCTGAGCTGAAGCTTGGCGCGGCGTATCCGGACAATGGCGAGACGGAAACGGAGCTGCTGCTGATCGACAACGCAG
AAGAGACGGATGCAGGCGAGGAAGCAGAAGAGCTGGAAACGGTGCAGTTCGAGGCGAAAGCGATCGCTAAGGAAATTCGC
AAACTGATTTCATCACCGTTTAAGGTGTATGACGGAAAAACGAAAACACACCGCAATATTCAATACCGCGATATCGTGAT
TTTACTGCGTTCCATGCCGTGGGCGCCGCAAATCATGGAGGAGCTGAGAGCACAGGGCATACCGGTTTACGCCAATTTAA
CGTCAGGCTATTTTGAAGCGGTCGAAGTCGCCGTCGCGATTTCGGTGCTGAAGGTGATCGATAACCCGTATCAGGATATA
CCGCTTGCCTCTGTGCTGCGCTCACCGATTGTCGGAGCAGATGAAAACGAGCTGTCTTTGATCCGGCTTGAAAACACAAA
AGCTCCGTACTATGAAGCGATGAAAGACTACTTGGCAGCCGGCGACCGGAACGGCGAGCTTTATCAAAAGCTGCAAACCT
TTTACGGGCATCTGCAAAAATGGCGCGCGTTTTCGAAAAACCACTCAGTATCTGAGCTGATTTGGGAAGTGTACCGCGAC
ACGAAATATATGGATTATGTCGGCGGGATGCCGGGCGGAAAACAGCGCCAGGCCAATTTGCGCGTCCTTTACGACCGGGC
GCGCCAATATGAATCAACGGCGTTTCGCGGCCTGTTCCGTTTCCTGCGATTTATCGAACGCATGCAGGAGCGGGGCGATG
ATCTTGGTACGGCGAGAGCGCTCAGCGAGCAGGAGGATGTTGTCCGCTTAATGACGATCCACAGCAGCAAGGGGCTTGAA
TTCCCTGTTGTGTTTGCAGCGGGTCTCGGCCGCAATTTCAACATGATGGACTTAAACAAATCGTACCTGCTGGACAAGGA
GCTCGGGTTTGGCACGAAGTATATTCACCCGCAATTGCGTATCAGCTATCCGACGCTTCCGCTCATTGCGATGAAGAAAA
AAATGCGCAGGGAGCTGCTGTCAGAGGAATTGCGGGTACTCTATGTTGCATTAACAAGAGCAAAGGAAAAATTGTTTCTG
CTTGGTTCGTGCAAGGATCATCAGAAACAGCTCGCAAAATGGCAGGCATCCGCGTCACAAACTGACTGGCTTCTTCCGGA
GTTTGACCGCTATCAGGCAAAAACGTATTTAGATTTCATCGGGCCGGCTCTTGCCAGACACAGAGATATGGAGACTTTGG
CTGAAAACGGTGCGACAGCGCGTCCTGATATATCAGGACACCCGGCTCGTTTTGCCGTCCGAATGATCCATTCCTATGAT
TTGCTGGATGATGATTTGGAGGAAAGAATGGAAGAAAAAAGCGAGCGCCTAGAATCGATTCGCCAAGGTGAACCAGTTCC
CGGCTCGTTTGCATTTGATGAAAAAGCCCGCGAGCAGTTGAACTGGACCTACCCGTATCACGAGGTGACGCAAATTAGCA
CAAAGCAGTCGGTATCTGAGATCAAGAGAAAAAGAGAGTACGAGGATGAATACAGCGGCAGGGCCCCTGTTAAACCGGCT
GACGGCAGCATGCTGTACAGACGGCCCGCTTTCATGATGAAAAAAGGCCTGACGGCGGCAGAGAAAGGAACGGCCATGCA
TACGGTGATGCAGCATATCTCACTGACACATGTGCCGACGATAGAAGAAGCGGAGCAGACGGTTCATAAGCTTTATGAAA
AAGAACTGCTCACGGAAGAACAAAAAACCGCTATTGATATAGAAGAAATCGTGCAATTCTTCCATACGGAAATCGGCGGA
CAGCTGATCAGCGCGCAATGGAAGAATAGGGAAGTACCGTTCAGTTTGGCGCTTCCAGCCAAGGAGATCTATCCTGATGC
ACAGGAGGCGGATGAGCCGCTTTTAGTGCAGGGAATCATTGATTGTCTCTATGAAACTGACGGCGGTTTATATCTTTTGG
ACTATAAATCGGACCGGATTAAGGGCAAATTCCAGCACGGATTTGAAGGAGCGGTCCCGATCTTGAAGAAACGATATGAA
ACGCAAATTCAGCTGTACACGAAGGCAGTTGAGCAAATTGCAAAAACAAAGGTAAAGGGATGTGCGCTTTATTTCTTTGA
CGGAGGGCACATTCTGACATTATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6H0WGJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

95.543

100

0.955