Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   G4P54_RS01930 Genome accession   NZ_CP048852
Coordinates   354668..355066 (-) Length   132 a.a.
NCBI ID   WP_024715487.1    Uniprot ID   A0A6H0WDS7
Organism   Bacillus tequilensis strain EA-CB0015     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 349668..360066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS01895 (G4P54_01890) - 350473..351609 (+) 1137 WP_167871609.1 zinc-dependent alcohol dehydrogenase -
  G4P54_RS01900 (G4P54_01895) - 351622..352077 (+) 456 WP_024715493.1 RDD family protein -
  G4P54_RS01905 (G4P54_01900) - 352159..352491 (+) 333 WP_167871610.1 YckD family protein -
  G4P54_RS01910 (G4P54_01905) - 352619..353041 (+) 423 WP_167873801.1 MarR family winged helix-turn-helix transcriptional regulator -
  G4P54_RS01915 (G4P54_01910) - 353029..353370 (+) 342 WP_024715490.1 DUF3147 family protein -
  G4P54_RS01920 (G4P54_01915) - 353390..354118 (+) 729 WP_024715489.1 AAA family ATPase -
  G4P54_RS01925 (G4P54_01920) - 354191..354599 (+) 409 Protein_333 family 1 glycosylhydrolase -
  G4P54_RS01930 (G4P54_01925) nin/comJ 354668..355066 (-) 399 WP_024715487.1 DNA-entry nuclease inhibitor Regulator
  G4P54_RS01935 (G4P54_01930) nucA/comI 355093..355539 (-) 447 WP_167871611.1 DNA-entry nuclease Machinery gene
  G4P54_RS01940 (G4P54_01935) tlpC 355713..357437 (-) 1725 WP_167871612.1 methyl-accepting chemotaxis protein TlpC -
  G4P54_RS01945 (G4P54_01940) hxlB 357550..358107 (-) 558 WP_167871613.1 6-phospho-3-hexuloisomerase -
  G4P54_RS01950 (G4P54_01945) hxlA 358113..358745 (-) 633 WP_167871614.1 3-hexulose-6-phosphate synthase -
  G4P54_RS01955 (G4P54_01950) hxlR 358974..359336 (+) 363 WP_024715482.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14862.83 Da        Isoelectric Point: 4.7210

>NTDB_id=423532 G4P54_RS01930 WP_024715487.1 354668..355066(-) (nin/comJ) [Bacillus tequilensis strain EA-CB0015]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVTSFEKKVTVPF
HVTENGIEIESIMSKRLSFDLPKGNYQLTCWTVPAEVSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=423532 G4P54_RS01930 WP_024715487.1 354668..355066(-) (nin/comJ) [Bacillus tequilensis strain EA-CB0015]
TTGATCAAGTCATGGAAGCCGCAAGAACTATCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCAGCACCTCC
TGTAATGGATTGGACTGATGAAGCGATTGAAAAAGGATATGCTGCGGCGGACGGAGCGATTTCGTTTGAAGCACAAAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAACCTCCTTCGAAAAAAAGGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAAACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAGTGTCAGACCTTCACGCAGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6H0WDS7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

94.697

100

0.947