Detailed information NTG0423532

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: IE382_RS17050
• Genome accession: NZ_CP061870
• Coordinates: 3116128..3117393 (+)
• Length: 421 a.a.
• NCBI ID: WP_041336160.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FX-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3111128..3122393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IE382_RS17030 (IE382_16945)	yrrB	3112499..3113119 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
IE382_RS17035 (IE382_16950)	mnmA	3113205..3114320 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
IE382_RS17040 (IE382_16955)	iscSA	3114348..3115490 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
IE382_RS17045 (IE382_16960)	cymR	3115509..3115925 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
IE382_RS17050 (IE382_16965)	rarA	3116128..3117393 (+)	1266	WP_041336160.1	replication-associated recombination protein A	Machinery gene
IE382_RS17055 (IE382_16970)	-	3117528..3118880 (-)	1353	WP_129093204.1	IS1182 family transposase	-
IE382_RS17060 (IE382_16975)	tcdA	3119013..3119777 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
IE382_RS17070 (IE382_16985)	aspS	3120027..3121805 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46526.39 Da
• Isoelectric Point: 7.1741

>NTDB_id=423532 IE382_RS17050 WP_041336160.1 3116128..3117393(+) (rarA) [Bacillus subtilis strain FX-1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKYLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=423532 IE382_RS17050 WP_041336160.1 3116128..3117393(+) (rarA) [Bacillus subtilis strain FX-1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAATATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995